Protein

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Genbank accession
YP_009795592.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MPLPSISNNPITYGKVMWTAIVSVLDSADPDDIPDLDELEGNIIFKPSARYLKTPASVPPLTIALMNRNVSLEDSQIDEQGRKFIKLEASSAGVVPDVFTWTATFNLSYKGVMVSIPDTTFQLLPDDEIDLTDYIAPAAPVAPVSPTIDEIFAARNQAVAARDDMVTMLAGIGFGSAEFASITRDYGALNDGSGNATGAFAAALAELSQGGGGTLIVPPGVYSVDTVGLVDPVENVDIISPYGSAFIRSRTDAPPLSGSWYRSSISGLIFDAYNLGGYGANVHMVESKIMDCTFMGWTGRGMSLNDGTYGDLGLLNYILRNHIIQSSGIGIFQTYRFVDSWIDYNNVGSTDANISLEGGPLRVGFNHFNGAPLRNIDLRGNRRITIVGNIGEGAREEAVRYVMPPWLTEDSPQVQLVANSFSNGGKAAAGVHPAIRIQGRAEGMSTKGFLISANNFGCEDAGSGWSNIIHATDVTDLSIVGNQWEGAYMVSPLSGTRVTNFISSGNSSGNT
Physico‐chemical
properties
protein length:511 AA
molecular weight: 54351,30660 Da
isoelectric point:4,50213
aromaticity:0,08611
hydropathy:-0,01057

Domains

Domains [InterPro]
DC_1109
ATT
1–238
DC_1109 DC_0830
IPR011050
STR
178–506
IPR011050
IPR012334
STR
184–510
IPR012334
YP_009795592.1
1 511
Architecture
ATT
STR
ATT 1-238 | STR 239-511
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009795592.1
1 511
Domain Start End Length (AA) Confidence
N-terminal 1 194 194 0,9889
Central domain 195 500 307 0,9969
C-terminal 501 511 10 0,2975
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-194
Central
195-500
C-terminal
501-511

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage BirksAndSocks
[NCBI] 		2047831 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009795592.1 [NCBI]
Genbank nucleotide accession
NC_047892 [NCBI]
CDS location
range 10877 -> 12412
strand +
CDS
ATGCCTCTGCCTAGTATCTCCAACAACCCGATCACCTACGGCAAGGTGATGTGGACTGCCATCGTCTCGGTTCTGGACTCGGCTGACCCCGATGACATTCCAGACCTTGACGAGCTCGAAGGTAACATCATCTTCAAGCCCAGCGCCCGGTACCTCAAGACGCCGGCCTCGGTCCCGCCGCTCACAATCGCGCTGATGAACAGAAACGTCAGCCTCGAGGATTCTCAGATCGACGAGCAGGGCCGCAAGTTCATCAAGCTCGAAGCGAGCTCGGCGGGCGTGGTGCCCGACGTGTTCACCTGGACGGCGACATTCAACCTGTCCTATAAAGGTGTCATGGTCAGTATCCCTGATACCACCTTTCAGTTGCTGCCGGATGATGAGATCGACCTCACCGATTACATCGCTCCGGCAGCACCTGTCGCTCCGGTGTCGCCCACGATTGACGAGATCTTCGCAGCCCGCAACCAGGCTGTCGCAGCTCGCGACGACATGGTGACGATGCTCGCGGGTATCGGATTCGGCAGTGCAGAGTTCGCGAGCATCACTCGCGACTACGGGGCGCTCAATGATGGCAGTGGAAACGCGACAGGAGCGTTCGCCGCAGCGCTTGCTGAGCTCAGCCAGGGCGGCGGCGGTACGCTGATTGTTCCGCCTGGTGTGTACTCGGTTGACACTGTCGGGCTTGTTGATCCTGTCGAGAACGTCGACATCATCTCGCCGTACGGCTCGGCATTCATTCGTTCGCGGACTGATGCGCCGCCGCTGAGTGGCTCTTGGTATCGCAGTTCGATCAGCGGTTTGATCTTCGATGCATACAACCTCGGCGGCTACGGCGCGAACGTGCATATGGTTGAGTCCAAGATTATGGACTGTACGTTCATGGGCTGGACCGGCAGGGGTATGTCGCTCAACGATGGAACGTACGGCGACCTGGGCCTGCTTAATTACATCTTGCGCAACCATATCATCCAGAGCAGCGGCATCGGAATCTTCCAGACGTACCGCTTCGTTGACTCGTGGATCGACTACAACAACGTAGGCTCAACGGACGCGAATATCTCGCTTGAGGGCGGGCCGTTGCGTGTAGGGTTCAATCACTTCAATGGTGCTCCACTGCGGAACATTGACCTTCGGGGCAACAGGCGAATCACCATCGTCGGTAACATCGGCGAGGGCGCTCGCGAGGAAGCTGTTCGATACGTCATGCCGCCGTGGCTGACGGAGGACTCGCCCCAGGTGCAGCTCGTTGCGAACAGCTTCTCCAATGGTGGCAAGGCGGCGGCGGGCGTGCATCCAGCCATCCGAATCCAGGGTCGCGCGGAGGGCATGAGCACCAAGGGCTTTCTTATCTCGGCAAACAACTTCGGATGCGAGGACGCCGGCTCTGGGTGGAGCAATATCATTCACGCTACCGACGTGACTGATCTCAGTATCGTCGGCAACCAGTGGGAAGGCGCATACATGGTGTCTCCACTTTCCGGAACGAGGGTTACGAACTTCATCTCATCTGGAAACTCCAGCGGTAACACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ef09c047d5e9714f905d5929b4c140886d3fffb7eadd2c7a11051e272dff9686
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8636
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50