Protein

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Genbank accession
WDQ27602.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MTISTTTIKNSYNGTGSQDVFAYTFKISSTADMQVIIRASTGTETVKSLTTHYTVSNAGNASGGNVTFTSGNIPSNTETVILRRNTTQVQALDLVENDPFTADSVEGAFDKNLALVQELQEQVDRSIKISRTNTMTSTEFTDNATARASKILAFDTNGELSVATELGSYKGNWSASTAYGSRDIVKDTSTNNIFIANTTHTSSGSQPLTTNTDSAKWDLLVDAATATTAQTAAGNSATASANSATASANSATAAATSESNANTHKTAAETAKTAAETAKTAAETAKTAAETALDTFDDRFLGAKSSNPTVDNDGNALIDGALYFDTTNDLMKVYNLANTTWYQLALTGTNQTNVNTVAGQISPTNNIATVAGANSNIGTVAGQISPTNNIGTLAGISGLSNLAAAHAAVTNVNNNLSAVQNFADVYRIASSAPTSSLNAGDLYFDTTANELKVYKSSGWAAAGSTVNGTANRFIYNITGTPTTLTGASGTGFAEASSKVLAYDAGFIDVYLNGVKQILGTDITATSGNSVVFGSALANGDVVDIVAYGTFELANININDLTNTPASLGSAGQALVVNSAGNALVYSNASTPEIYGFEMYYNTSTQTKTVTVAGGKFVIDGVSQDTLDLYKGNTYKFDLSDSSTASHPFRFATAADAAGSTEYTTGVTTSGTQGQAGAYVQIIVATGAVTLYYYCSSHSGMGSTANTPTPANNSLRVITTNEGADNISSATCANFGDVVFASSGITWSLVNTELVATI
Physico‐chemical
properties
protein length:757 AA
molecular weight: 77988,13800 Da
isoelectric point:4,51599
aromaticity:0,07398
hydropathy:-0,11295

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage EXVC032P Baldr
[NCBI] 		3029571 No lineage information
Host Candidadtus Pelagibacter sp. HTCC1062
[NCBI] 		198252 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDQ27602.1 [NCBI]
Genbank nucleotide accession
OQ414636.1 [NCBI]
CDS location
range 22401 -> 24674
strand +
CDS
ATGACAATTAGTACAACTACAATTAAGAACAGTTATAATGGTACAGGTAGCCAAGATGTATTTGCATATACATTTAAAATTAGTTCTACCGCTGATATGCAAGTTATTATTCGTGCATCAACAGGTACGGAAACTGTAAAAAGTTTAACTACACATTATACAGTTAGTAATGCTGGTAATGCAAGTGGTGGTAATGTTACATTTACATCTGGCAATATACCTAGCAATACAGAAACAGTAATTTTAAGAAGAAATACTACACAAGTACAAGCATTAGATTTAGTAGAAAATGATCCTTTTACAGCAGATAGTGTTGAAGGTGCATTTGATAAAAATTTAGCTTTAGTACAAGAATTACAAGAACAAGTAGATCGTTCAATAAAAATATCAAGAACGAATACTATGACAAGTACAGAATTTACAGATAATGCTACAGCTAGAGCATCTAAAATTTTAGCATTTGATACTAACGGAGAATTATCTGTTGCAACAGAATTAGGAAGTTATAAAGGAAATTGGTCTGCATCAACAGCATATGGTTCAAGAGATATTGTAAAAGACACAAGTACTAATAATATTTTTATTGCAAACACAACACACACATCAAGTGGATCACAACCATTAACAACTAATACTGATTCTGCTAAATGGGATTTATTAGTAGATGCGGCAACAGCAACTACAGCACAAACTGCGGCAGGTAATAGTGCAACAGCATCTGCAAATAGTGCAACAGCTAGTGCAAATAGTGCAACAGCGGCGGCAACATCAGAATCAAATGCTAATACTCATAAAACAGCGGCAGAAACAGCAAAGACAGCGGCAGAAACTGCAAAAACTGCGGCGGAAACTGCAAAGACTGCGGCAGAAACAGCATTAGATACTTTTGATGATAGATTTTTAGGTGCTAAATCTTCTAATCCAACTGTTGATAATGATGGCAATGCATTAATAGATGGTGCGTTGTATTTTGATACAACAAATGATTTAATGAAAGTTTACAATCTTGCTAATACTACTTGGTATCAATTAGCTTTAACAGGAACAAACCAAACAAATGTAAATACAGTAGCTGGACAAATAAGTCCGACAAATAATATAGCAACTGTTGCTGGTGCAAATTCTAATATTGGTACAGTAGCAGGTCAAATTTCACCTACAAATAATATAGGAACATTAGCAGGTATATCTGGTTTATCTAATTTAGCGGCGGCTCATGCGGCAGTTACAAATGTAAATAATAATTTATCAGCAGTACAAAACTTTGCAGATGTTTATAGAATTGCAAGTTCAGCACCAACATCAAGTTTAAATGCAGGTGATCTTTATTTTGATACAACAGCAAATGAATTAAAAGTTTACAAATCAAGCGGTTGGGCGGCGGCAGGTTCTACAGTAAATGGAACAGCAAACAGATTTATTTATAATATTACAGGAACACCAACTACTTTAACAGGTGCATCTGGTACAGGTTTTGCAGAAGCATCAAGTAAAGTTTTAGCTTATGATGCAGGATTTATAGATGTTTATTTGAATGGGGTTAAACAAATATTAGGAACAGATATAACTGCAACATCTGGTAATTCTGTAGTATTTGGATCAGCATTAGCAAATGGTGATGTTGTAGATATTGTAGCATATGGAACATTTGAATTAGCTAATATTAATATTAATGATTTAACAAATACACCTGCATCATTAGGATCAGCAGGACAAGCTCTTGTTGTAAACTCTGCGGGAAATGCATTAGTATATTCTAATGCTAGTACACCAGAAATATATGGATTTGAAATGTATTATAATACATCTACTCAAACTAAAACTGTTACAGTAGCAGGTGGTAAATTTGTTATAGATGGAGTATCACAAGATACTTTAGATTTATATAAAGGTAATACTTACAAATTTGATTTATCTGATAGTTCTACAGCATCACACCCATTTAGATTTGCTACAGCGGCAGATGCGGCAGGATCAACAGAATATACTACAGGAGTTACAACAAGTGGTACACAAGGCCAAGCTGGTGCATATGTACAAATAATAGTAGCAACAGGGGCAGTAACATTATATTATTATTGCAGTAGTCATAGTGGTATGGGTAGCACAGCAAATACACCAACACCAGCAAATAATTCATTAAGAGTTATTACAACTAATGAAGGGGCAGATAATATATCTTCTGCTACCTGTGCTAATTTTGGGGATGTAGTTTTTGCTAGTTCTGGTATAACATGGTCATTAGTAAATACAGAATTAGTAGCAACAATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
552c0e86d9243738d2093b76f6d7b6d838ab3b401bdca7ad020a5a9c0a45dcb6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7440
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Draft Genome Sequences of Pelagipodophages Hodr EXVC031P and Baldr EXVC032P, Isolated from the Sargasso Sea Lewis,P.J., Buchholz,H.H., Michelsen,M.L. and Temperton,B. 2014-05 — GenBank