Protein

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Genbank accession
XAG97273.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,59
TF
Evidence RBPdetect2
Probability 0,71
Protein sequence
MSIHITRGNMLYGTGKPTISAEYYGQTYIDTGSNPRAIWVATGQNNESWNEVSQKGHKHTVSDFSDLIPEITKIVQDQGIEAALIALKGGNNMWEGDWNNFTGALRVGGAPVLSTNSSIGELKDVTLGENLKVNTLLGWNGSTFVPYEVTGASPSEGGIDFSQYVRKDELVSTLDSSASDRALAASAGKTLLETMKAKYSPIDHTHTNLAPANHKHENYLDKTINQTMTGSLVLDTDGSGLPLSIRNSFGRLDFQFPTSPTDSLIIATSGNGGTELNDIIFGGVDGNTGGSLTLNFGRIHVPAGQMTIGDTKRYLGMPALKISEPNLTYVGNLNRKPAIDINGGAMNGIGQLVFRNYSSSRDAAILFPRNYAGSGQPTESGYYHYLRMSDGELLTDTALSSEQSYISFKGVRIFFSVTDPGKAGREGDIWIKI
Physico‐chemical
properties
protein length:433 AA
molecular weight: 46610,44990 Da
isoelectric point:5,51664
aromaticity:0,08314
hydropathy:-0,32379

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAG97273.1
1 433
Domain Start End Length (AA) Confidence
N-terminal 1 231 231 0,9860
Central domain 232 422 192 0,1842
C-terminal 423 433 10 0,9969
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-231
Central
232-422
C-terminal
423-433

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterococcus phage VRE9_2
[NCBI] 		3141816 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterococcus faecium
[NCBI] 		1352 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAG97273.1 [NCBI]
Genbank nucleotide accession
PP680568.1 [NCBI]
CDS location
range 73673 -> 74974
strand -
CDS
ATGTCAATTCATATTACTAGAGGAAATATGCTATACGGCACAGGTAAACCAACCATTAGTGCTGAATATTATGGACAAACTTATATTGATACAGGTTCAAATCCTAGAGCTATTTGGGTAGCCACAGGACAAAATAATGAATCATGGAATGAGGTTTCTCAAAAAGGTCACAAACATACAGTATCAGATTTTTCTGATTTGATTCCAGAGATTACAAAGATTGTTCAAGATCAAGGTATTGAAGCAGCCTTAATAGCTCTTAAGGGTGGAAACAATATGTGGGAAGGAGATTGGAACAATTTTACTGGAGCATTACGAGTAGGAGGAGCACCAGTATTATCAACCAACTCTTCTATTGGAGAACTTAAAGATGTTACACTAGGAGAAAATCTAAAAGTTAATACATTACTTGGTTGGAATGGTAGTACTTTTGTTCCTTATGAAGTGACTGGTGCATCCCCAAGTGAAGGTGGAATTGATTTCAGTCAATATGTCCGTAAAGATGAATTAGTTTCTACATTAGATAGTTCAGCTTCTGATAGAGCATTAGCAGCATCTGCTGGTAAAACTTTATTAGAAACAATGAAAGCAAAATATTCACCTATCGACCATACTCACACAAATTTAGCTCCAGCAAATCATAAACATGAAAATTATTTAGATAAAACTATAAATCAAACCATGACAGGAAGTCTTGTATTAGACACAGATGGCTCAGGACTTCCATTAAGTATTAGGAATAGTTTTGGAAGATTAGATTTCCAATTTCCGACAAGCCCAACAGATTCGTTAATTATAGCGACAAGTGGTAATGGTGGAACAGAATTAAATGATATTATTTTTGGTGGTGTTGATGGAAATACTGGTGGTTCTTTAACATTGAATTTTGGACGAATTCATGTTCCTGCAGGTCAAATGACGATTGGAGATACTAAACGATATTTAGGTATGCCAGCGTTAAAAATTTCTGAGCCTAATTTGACTTATGTAGGTAATTTAAATCGTAAACCAGCTATTGATATAAATGGTGGAGCAATGAATGGTATTGGACAGCTTGTATTTAGAAATTACTCTAGTAGTCGTGATGCAGCTATTTTATTCCCTAGAAATTATGCTGGTAGTGGACAACCAACAGAAAGCGGATATTATCATTATCTAAGAATGAGTGACGGCGAACTATTAACAGATACTGCATTATCTTCTGAACAATCATATATATCATTTAAAGGGGTTAGAATTTTCTTTAGTGTTACTGATCCAGGTAAGGCAGGTAGAGAAGGAGATATTTGGATTAAAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6f3c89df981f411a439ece683767f231c1728d478dd6d74a00e1ffc3f1ff9425
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6274
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage library of National Institute of Infectious Disease Japan Azam,A.H., Ojima,S. and Kiga,K. 2022-12-05 — GenBank