Protein

View in Explore
Genbank accession
AHJ87360.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MTQISVTRALAEVKALNDRIEKATRQATFISVTVGGKVPNGSDLQATTNTIRANLQSVQDLIARRQAVKGAVVRSNAVTEVVINGVTMTVAEAIERKGSIDKERTLLAVLQQQLNQNRVAVERNNVTMNQKLDMMIQTAVGKERKATEEELEAISKPYTASNITAPLDPNGLEAVIAKLEAEINGFVFEVDFVLSEANAKTLIEA
Physico‐chemical
properties
protein length:205 AA
molecular weight: 22245,16770 Da
isoelectric point:5,72820
aromaticity:0,02439
hydropathy:-0,12683

Domains

Domains [InterPro]
Coil
6–26
Coil
AHJ87360.1
1 205
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage phiPsa374
[NCBI] 		1458843 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas syringae pv. actinidiae ICMP 18800
[NCBI] 		1104681 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AHJ87360.1 [NCBI]
Genbank nucleotide accession
KJ409772 [NCBI]
CDS location
range 62331 -> 62948
strand +
CDS
ATGACACAGATTTCCGTAACTCGCGCTCTGGCAGAAGTTAAAGCACTGAACGACCGCATCGAGAAAGCAACCCGACAGGCCACCTTCATCAGCGTCACTGTTGGTGGCAAGGTTCCTAACGGTTCTGATCTGCAAGCAACAACCAACACCATCCGAGCAAACCTGCAATCGGTTCAAGACCTGATCGCTCGTCGTCAGGCTGTGAAGGGCGCTGTTGTTCGTTCCAACGCTGTAACCGAGGTTGTCATCAACGGCGTCACCATGACCGTCGCTGAGGCTATTGAGCGTAAAGGCTCTATCGACAAAGAGCGTACCCTTCTGGCTGTCCTGCAACAACAGCTCAACCAGAACCGCGTAGCAGTTGAACGCAACAACGTCACCATGAACCAGAAGCTGGACATGATGATTCAGACTGCTGTTGGTAAGGAGCGTAAAGCTACCGAGGAAGAACTGGAAGCCATCAGCAAGCCTTACACCGCATCGAACATCACTGCTCCACTTGACCCTAACGGGCTGGAAGCTGTGATCGCCAAGCTGGAAGCAGAAATCAACGGGTTTGTATTCGAAGTTGACTTCGTTCTGTCTGAGGCAAACGCTAAGACTCTGATCGAGGCGTAA

Tertiary structure

PDB ID
e3808cddb5f73ccf3ba50338a38e38f0c2852a55edae4eb0595e62829ac8367a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9525
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of Pseudomonas phiPsa374-like phages Warring,S., Malone,L.M., Easingwood,R.A., Rigano,L., Frampton,R.A., Lopez Acedo,E., Templeton,M.D., Kleffmann,T., Bostina,M. and Fineran,P.C. 2024-10 — GenBank