Protein

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Genbank accession
AVO24199.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,93
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MQSINQPQKILVPFAQNDSAKVEIPVTTTSPGRFSQTLGSPPETALPPESGGTPPQLPDFNGAMNQQSRLAWWMMAGGRFAFDATWANNTYVNGYPRGAVLPAAIGAGLIGMGEWYNNAEANTADPDVNGAGWVPGYHYGVTALTGQTGGTLTLSPALAAKRTLTIAGTLTSNLVVVLPTWVYTWRIVNNTGGAYTVTVKNAATTGVVIPQNGVSTTVHCDGTQVSFDSPNIPAAVLSTQPMQLGQATGRLLAVRRFAVAGATTYTPTTGTNTVIVEVVGAGASGAGTVAALSGQAAAGGGGGGGAYAKARIVSGFAGVTITVGAPGVSAAPGNAGQAGGASSFGSLVVCPGGAGGPQGQGSSSANYSAPGLGAAAPTFGGSADVIMAASGAAGSPGLLFSSSIVISGNGANTPYGSGGGGAGSSTAGQTGTGLSAGGQGSGGGGGFSTSGGSPGSGGSGGGGLVLVWEYA
Physico‐chemical
properties
protein length:471 AA
molecular weight: 45421,82990 Da
isoelectric point:6,71959
aromaticity:0,06794
hydropathy:0,11847

Domains

Domains [InterPro]
IPR049304
260–467
IPR049304
AVO24199.1
1 471
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage XPV1
[NCBI] 		2099860 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVO24199.1 [NCBI]
Genbank nucleotide accession
MG944234 [NCBI]
CDS location
range 21132 -> 22547
strand +
CDS
ATGCAATCGATCAATCAGCCGCAAAAAATCCTCGTACCCTTCGCGCAAAACGATAGCGCGAAGGTCGAGATTCCGGTGACGACCACGAGCCCGGGGCGTTTTTCCCAGACCTTAGGTTCGCCGCCGGAGACTGCGCTGCCGCCCGAGTCCGGCGGTACCCCTCCTCAGCTGCCGGATTTTAACGGCGCGATGAATCAACAGTCGCGCCTTGCGTGGTGGATGATGGCCGGCGGTCGTTTTGCGTTCGACGCGACCTGGGCCAACAACACCTACGTCAACGGCTATCCGCGTGGTGCGGTGCTGCCCGCCGCAATCGGTGCCGGTCTGATCGGCATGGGCGAGTGGTACAACAACGCCGAAGCTAACACGGCCGACCCGGACGTCAACGGCGCAGGTTGGGTGCCGGGCTATCACTACGGCGTGACGGCGCTGACGGGCCAGACTGGCGGCACGCTGACGCTATCTCCGGCGCTGGCGGCTAAGCGCACGCTCACAATCGCCGGTACGCTGACGTCGAATCTCGTCGTTGTCCTGCCGACCTGGGTCTACACCTGGCGCATCGTCAATAACACCGGTGGCGCGTACACCGTCACGGTAAAAAATGCGGCGACGACCGGCGTGGTCATCCCTCAAAACGGGGTGTCGACGACCGTACATTGCGACGGCACGCAGGTCTCGTTCGACTCGCCTAACATCCCGGCCGCGGTGCTGTCCACGCAGCCAATGCAGCTCGGTCAGGCGACAGGTCGTTTACTGGCCGTGCGCCGCTTTGCCGTCGCTGGCGCGACGACCTACACACCGACAACCGGTACTAACACCGTGATCGTCGAGGTCGTGGGCGCAGGCGCGAGCGGGGCCGGTACCGTGGCCGCGTTGAGCGGGCAAGCCGCCGCAGGTGGCGGTGGCGGTGGCGGCGCCTACGCTAAGGCGCGCATCGTGTCGGGCTTTGCGGGCGTGACGATCACCGTCGGCGCGCCGGGCGTATCGGCTGCACCGGGTAACGCAGGTCAAGCCGGTGGCGCATCGAGCTTTGGTAGCTTGGTCGTGTGTCCGGGCGGAGCGGGCGGCCCGCAAGGCCAGGGTAGCTCGTCGGCTAACTACTCCGCCCCCGGTCTGGGTGCCGCGGCGCCGACCTTTGGCGGTAGTGCCGACGTGATCATGGCCGCAAGCGGCGCGGCAGGTAGCCCGGGTCTGTTGTTCAGCTCGAGCATCGTCATCAGCGGCAACGGTGCTAACACGCCGTACGGTTCGGGCGGTGGCGGCGCGGGTTCGAGCACGGCCGGTCAGACTGGTACGGGGTTGAGCGCCGGCGGCCAGGGTAGCGGGGGCGGTGGCGGGTTCAGTACGTCGGGCGGTAGCCCTGGTAGCGGCGGTTCGGGCGGTGGCGGCCTCGTACTCGTTTGGGAATACGCGTAA

Tertiary structure

PDB ID
64081c39329bc9505ef925ba4b9295ba7d1bdf6532e0cde0f242d8a4fa2a2730
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9004
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, characterization and comparative genomics of Xanthomonas oryzae pv. oryzae bacteriophages Varga,I., Molnar,J., Gazdag,A., Szucs,D., Doffkay,Z., Valappil,S.K., Papp,S., Pinter,R., Vera Cruz,C.M., Ricardo,O., Vizi,T., Schneider,G., Rakhely,G. and Kovacs,T. 2019-07-03 — GenBank