Protein

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Genbank accession
YP_009949296.1 [GenBank]
Protein name
MFS transporter
RBP type
TSP
Evidence DepoScope
Probability 0,61
Protein sequence
MTAVSQTETRSSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGYGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGGALLLAAILPVSAPFKFALLVIGRLILGFGESQLLTGALTWGLGIVGPKHSGKVMSWNGMAIYGALAVGAPLGLLIHSHYGFAALAITTMVLPLLAWACNGTVRKVPALAGERPSLWSVVGFIWKPGLGLALQGVGFAVIGTFVSLYFASKGWAMAGFTLTAFGGAFVVMRVMFGWMPDRFGGVKVAIVSLLVETVGLLLLWQAPGAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIALGVSGPLAGMLATTFGYSSVFLAGAISAVLGIIVTILSFRRG
Physico‐chemical
properties
protein length:392 AA
molecular weight: 40512,75050 Da
isoelectric point:10,10144
aromaticity:0,10714
hydropathy:0,94235

Domains

Domains [InterPro]
NF009048
Unmapped
1–392
NF009048
NF003477
Unmapped
5–391
NF003477
IPR050171
Unmapped
6–390
IPR050171
IPR036259
STR
10–387
IPR036259
G3DSA:1.20.1250.20:FF:000269
Unmapped
10–387
G3DSA:1.20.1250.20:FF:000269
IPR036259
STR
14–391
IPR036259
IPR037541
Unmapped
17–392
IPR037541
IPR011701
STR
20–249
IPR011701
cd17489
STR
20–389
cd17489
IPR020846
STR
169–392
IPR020846
YP_009949296.1
1 392
Architecture
STR
STR 10-392
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009949296.1
1 392
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0084
Central domain 11 252 243 0,2695
C-terminal 253 392 139 0,1916
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-252
C-terminal
253-392

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage 500465-2
[NCBI] 		2716352 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009949296.1 [NCBI]
Genbank nucleotide accession
NC_049343 [NCBI]
CDS location
range 26938 -> 28116
strand -
CDS
ATGACTGCTGTAAGCCAAACCGAAACACGATCTTCTGCCAATTTTTCGCTCTTCCGCATCGCTTTTGCGGTTTTTCTCACCTACATGACCGTAGGGCTGCCGTTGCCGGTTATCCCGCTGTTTGTTCATCATGATCTGGGCTATGGCAATACCATGGTCGGGATTGCCGTCGGGATTCAGTTTCTGGCTACGGTGCTGACGCGTGGCTATGCCGGGCGACTGGCCGATCAATATGGTGCAAAACGTTCGGCGCTTCAGGGGATGTTAGCTTGTGGTCTGGCTGGCGGCGCGTTGCTGCTGGCGGCGATTTTGCCTGTCTCCGCACCGTTCAAATTTGCCCTGTTGGTCATCGGGCGTTTGATTCTTGGGTTTGGTGAAAGCCAGTTACTGACAGGCGCTCTGACCTGGGGGTTAGGCATCGTAGGGCCAAAACACTCTGGCAAAGTGATGTCATGGAATGGAATGGCGATTTACGGTGCCCTCGCTGTTGGTGCTCCGCTTGGCCTGTTGATTCATAGCCATTACGGTTTTGCCGCACTGGCGATCACCACAATGGTATTACCCTTACTGGCGTGGGCCTGTAACGGCACAGTGCGCAAAGTACCGGCCCTGGCGGGAGAACGTCCATCGCTGTGGAGCGTTGTCGGGTTTATCTGGAAACCAGGGTTAGGGCTGGCACTACAAGGCGTTGGTTTTGCGGTTATCGGGACTTTCGTTTCGCTCTACTTTGCCAGCAAAGGATGGGCGATGGCGGGCTTTACTCTTACCGCGTTTGGCGGCGCATTTGTCGTGATGCGCGTCATGTTTGGCTGGATGCCGGACCGTTTTGGCGGCGTGAAAGTGGCGATTGTCTCTCTGCTTGTAGAAACGGTGGGCTTGTTGCTGCTCTGGCAAGCCCCAGGTGCGTGGGTCGCATTAGCGGGCGCGGCGTTAACCGGAGCCGGATGTTCGCTTATCTTTCCTGCGCTGGGCGTGGAGGTGGTTAAACGCGTCCCCTCACAAGTTCGCGGCACCGCACTGGGCGGTTACGCCGCGTTTCAGGATATCGCCCTCGGCGTCTCCGGGCCGCTGGCGGGAATGCTGGCGACCACGTTTGGTTACTCTTCGGTATTTCTTGCCGGGGCGATCTCTGCGGTGCTGGGAATTATTGTCACGATACTGTCATTTCGTCGGGGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
20e783790ae7340843e5b9704fc8dd5bb1b7c1ef21f2370185edf96bc3019f13
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9029
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Comparative genomics of CFA/I and CS6-producing ST-only enterotoxigenic Escherichia coli associated with human diarrhea Hazen,T.H., Nagaraj,S., Barry,E.M., Bitoun,J., Chen,W.H., Tennant,S.M. and Rasko,D.A. 2017-06-14 — GenBank