Protein

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Genbank accession
YP_004539119.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MATVNRYEGDGTTTSFAVTFPQYSWTSIVVLLDQVEQTTGYVYNSITKSIVFATAPADGVSITLKRLSSTDLLYKFSEGAAFTGVNLDADFNQFASAVEEVNNAVDKYYVDDLLTDEIKARQEADASLQSQITGGTPTLGNQISTVSWHGQTITNSIDVPAGMNAFSVGPQVTIAPGQSVNLGEGSHWSILGNAFEIDDLYNLTANNITTSDGASTVSVATLAGLDGRTTSLETRMTTEEGKTQPINKGGTGATDAAAARTNLGLGTIATQAASAVSIGGGTIAGINDLAVADGGTGASTAAVARSNLGAAASGANTDITSITGSAATLTTPRSIRTNLASTTAVNFDGSTNITPGVTGTLPIANGGTGGATVAAAHAALGQLYSAGVLTVPNGAGTPVKIQAGSSTGTTDASGNLAITYPSAFSTNVLAVIPTNGDSATGDIIMSVQGFSTANLTGFSVHCSGSVSAARRINWIAIGI
Physico‐chemical
properties
protein length:479 AA
molecular weight: 48193,55350 Da
isoelectric point:4,44080
aromaticity:0,05637
hydropathy:0,09833

Domains

Domains [InterPro]
DC_0044
STR
1–477
DC_0044
IPR005604
ATT
3–91
IPR005604 G3DSA:2.60.40.3940
IPR054075
RBD
401–478
IPR054075
YP_004539119.1
1 479
Architecture
ATT
STR
ATT 1-91 | STR 92-478 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pantoea phage LIMEzero
[NCBI] 		943335 Uroviricota > Caudoviricetes > Autographivirales > Stentvirinae > Waewaevirus
Host Pantoea agglomerans
[NCBI] 		549 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004539119.1 [NCBI]
Genbank nucleotide accession
NC_015585 [NCBI]
CDS location
range 34835 -> 36274
strand +
CDS
ATGGCAACTGTAAATCGCTATGAAGGCGACGGCACAACTACGAGTTTTGCCGTTACCTTTCCGCAATACTCATGGACGAGTATTGTTGTCCTGCTTGACCAGGTTGAGCAGACCACAGGATACGTATATAACTCCATCACCAAGTCAATCGTGTTCGCTACTGCACCGGCTGACGGGGTGTCTATTACACTCAAGCGCCTATCCAGCACAGACCTCCTGTACAAATTCAGTGAGGGTGCTGCGTTCACCGGCGTTAACCTGGACGCCGACTTCAACCAGTTCGCGTCTGCTGTAGAAGAAGTCAACAACGCCGTCGATAAATATTACGTCGATGACCTGCTGACTGACGAGATTAAAGCGCGCCAGGAGGCTGATGCCTCGCTGCAGTCGCAGATTACTGGTGGTACACCAACACTCGGCAACCAAATTTCAACGGTGTCCTGGCACGGTCAGACCATCACTAACTCAATCGACGTGCCCGCTGGCATGAATGCATTCTCAGTGGGACCACAAGTGACCATCGCGCCGGGGCAGTCAGTTAACCTGGGTGAAGGTTCACATTGGTCTATCCTGGGTAATGCCTTCGAGATTGATGACCTGTACAACCTGACCGCCAACAACATCACCACGAGTGATGGTGCCAGCACTGTCAGCGTGGCTACGCTGGCTGGCCTGGATGGCCGTACCACGTCGCTTGAAACCCGCATGACTACCGAGGAGGGCAAGACCCAGCCTATCAACAAGGGCGGTACTGGTGCTACCGACGCGGCTGCAGCGCGGACTAACCTGGGCCTGGGCACGATTGCCACACAGGCTGCATCAGCCGTGAGTATCGGCGGCGGCACGATTGCAGGCATCAATGACCTGGCGGTAGCTGACGGCGGCACCGGCGCAAGTACAGCTGCTGTGGCACGTTCAAACTTAGGCGCTGCTGCGTCTGGTGCTAACACAGACATTACCAGTATCACTGGCTCTGCCGCTACGTTGACCACGCCGCGCTCAATCAGGACTAACCTGGCCTCTACTACGGCGGTTAACTTCGATGGCTCTACCAACATTACCCCTGGCGTGACCGGCACACTGCCAATCGCCAATGGTGGTACTGGTGGTGCGACTGTTGCGGCTGCTCACGCAGCGCTGGGTCAGCTGTACTCTGCAGGTGTGCTCACTGTGCCTAATGGTGCAGGTACACCTGTCAAGATTCAGGCTGGCAGTTCAACCGGTACTACAGACGCCAGCGGCAACCTGGCGATTACCTACCCGTCAGCATTCAGTACGAACGTGCTGGCAGTTATCCCAACGAACGGTGACTCAGCTACCGGCGATATCATTATGTCTGTGCAGGGCTTCTCTACTGCGAACCTCACCGGCTTCTCAGTTCACTGCTCAGGCTCTGTGTCTGCTGCCCGCCGTATCAACTGGATTGCTATCGGGATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1b324ea1a4e76a65968d307b5352da6fe9614745ab04763704961e64a69d7b49
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6670
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50