Protein

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Genbank accession
ARH11799.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,66
TF
Evidence Phold
Probability 1,00
Protein sequence
MADLSLYKVDLDTPQPNGRKGESPRAAFTKYNDLLAHLEAGGGGSFISATEPTQTFAFMEWIDTSTTPAIIKRRNADDNAWITIGSYEKPITDFVDKVDGKGLSTNDYTNEDKVIVDGVGDALNAGKVLSTNDYTNEDKAIVDGVGNALNTKVDKVTGKELSTNDYTDEDKNIVKSVLWTSDANFIAGMCSVQSGQQYVAVQNSGPNNGGAVNPSTDTDWSHWKPTWALNQVENRLKGNQNWNIPGRTGHPLPDATPRDYPVGAEIALGVFTELEITNATLIDRVFSADAGALKINNNYDISGFFGIKLHDNRIAVAAPNSISGTGVSKTTSFIYVNINRLIALGIPRGAHKFVGCSELPGIWPDVSEEESADAVLFNKEYASVPIGAEIAFDTPPPTNDPRFRFVKLTADDAYNGSLLNNKVISGTAPNLVVKMTVNSSLSPINGQQIFMLNTMGAMPTPGLTSGVIIQDAMRNLTGSVRALYTGGSEQYDGSLAMSIYGGSPAKVGATGVDPGANYTISFDASLQVPTADRFQVFGVSQVFYKRIF
Physico‐chemical
properties
protein length:548 AA
molecular weight: 58773,90260 Da
isoelectric point:4,80451
aromaticity:0,08577
hydropathy:-0,25146

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Strym
[NCBI] 		1897749 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARH11799.1 [NCBI]
Genbank nucleotide accession
KX581099.3 [NCBI]
CDS location
range 47368 -> 49014
strand +
CDS
ATGGCTGATTTATCGCTATATAAAGTTGATCTAGATACACCACAACCAAACGGAAGAAAAGGCGAAAGCCCAAGAGCCGCGTTTACAAAATATAACGACCTTCTCGCTCACCTTGAAGCTGGTGGTGGTGGTAGCTTTATTTCAGCTACAGAACCAACACAAACATTCGCATTCATGGAGTGGATAGATACATCAACCACGCCAGCTATTATCAAGCGAAGAAACGCAGATGATAATGCATGGATAACGATCGGTAGTTATGAAAAGCCAATCACTGACTTTGTGGATAAAGTCGACGGAAAGGGACTTTCAACCAACGACTACACCAATGAAGATAAAGTAATTGTTGATGGTGTTGGTGATGCGCTTAATGCAGGTAAGGTTCTATCAACCAACGACTACACCAATGAAGATAAAGCAATTGTTGATGGTGTTGGCAATGCGCTTAACACGAAAGTAGATAAGGTTACCGGAAAAGAACTTTCAACCAACGACTATACCGATGAAGATAAAAACATCGTAAAGTCTGTATTATGGACAAGTGATGCAAATTTCATTGCTGGCATGTGCAGCGTACAAAGCGGCCAGCAGTACGTCGCCGTGCAAAATAGCGGACCAAACAACGGCGGCGCTGTTAATCCATCAACAGACACAGACTGGAGCCATTGGAAACCAACTTGGGCATTAAACCAAGTCGAAAACCGCCTGAAAGGAAATCAAAACTGGAATATACCGGGGCGCACTGGGCATCCACTTCCTGATGCGACGCCAAGGGACTATCCCGTTGGAGCTGAAATTGCTCTTGGTGTTTTTACAGAACTAGAAATAACCAATGCAACATTGATTGATCGGGTTTTTTCGGCGGATGCTGGCGCGCTAAAAATTAATAACAATTACGATATTTCAGGATTTTTTGGAATTAAATTACACGACAATCGTATTGCTGTAGCTGCTCCAAATTCTATATCCGGCACCGGAGTATCGAAAACAACAAGCTTTATTTATGTAAATATAAACAGACTTATCGCGCTAGGAATACCACGCGGAGCACACAAATTCGTGGGCTGTAGCGAACTTCCCGGCATTTGGCCAGATGTGAGTGAGGAAGAGTCTGCTGATGCTGTTCTGTTTAACAAAGAGTATGCGTCAGTGCCGATTGGTGCTGAAATAGCGTTCGATACGCCACCACCAACAAATGACCCGCGTTTCCGTTTTGTTAAGCTAACTGCTGACGATGCTTACAATGGTAGCCTTCTCAATAACAAAGTGATTTCTGGAACGGCTCCAAATTTAGTTGTGAAAATGACCGTAAACTCTTCGCTGTCACCTATCAACGGACAGCAAATTTTCATGCTAAACACAATGGGAGCAATGCCAACTCCGGGCCTAACTTCTGGTGTGATTATTCAAGATGCAATGCGTAACTTAACTGGCTCTGTTCGCGCCCTGTATACTGGCGGCAGTGAGCAATACGATGGCTCTCTAGCTATGTCGATTTACGGCGGTAGTCCTGCTAAAGTTGGAGCTACAGGAGTCGATCCAGGCGCTAATTACACAATATCTTTTGATGCATCACTGCAAGTTCCAACAGCAGACAGATTCCAAGTTTTTGGGGTTAGTCAAGTATTCTACAAGAGGATTTTCTAA

Tertiary structure

PDB ID
0a1f3322b2630f4abd9c4355321ccc5d11e38488ad80f65189491a0d64c2f90a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5349
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Stumbling across the same phage: Comparative genomics of widespread temperate phages infecting the fish pathogen Vibrio anguillarum Kalatzis,P.G., Rorbo,N., Castillo,D., Mauritzen,J.J., Jorgensen,J., Kokkari,C., Zhang,F., Katharios,P. and Middelboe,M. — — GenBank