Protein

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Genbank accession
CAM0106890.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSDLDNAIKSINESAVKAENTAGFLDDMSTFDDQSSVTNPNNGQIVASIPKQVKDRTDELFAAAESDINQAVSDAAQSATDAQDAANSIGRYQGLWPDSGGSALKGDTYQTQVSGVETGKYFTALQNTTVDPIDDDVNWRAILSNQSLGGLTSYQAANVSDMIAGRVISGEVIPHADGQVWEWAGYYSPNDGGGNKGVVKLGSHTEDNGIIFSIDSNTYVEADTKDGINVLQFGLIPSDHTTTDRAQAAYNSGVSKVKWPKRDYIIDAVLNGLNGILVKSNTTTIIDAGSTLTAFAPGAAEYAILDAIQQSNVFFYVEGVEFIGDRSTHTGTIGEQGFGIRIGECDRYVIRGGTYRDFWGDGLFIGKFGAPGSPPSTNGYIRGVLCDNNRRQGMSIVVANGLVVEDSKFLNSNGTSPESGVDSEPNLNDLPNYNITFRNCEFSGTGGGFNAPFSDGTSDFHFYKCIFNGKANQALIGDALQFRSDGLHGISTFNECTFNGIVREAENAIFTHCEFIAGDEYLQTVWVFSCTNDTVVKLIDCTILAKGEKRPLSEGGSTLPTTGKKFVRTRFIKQGDQGALFAVNHSSGYSTYTDCELIHQGTVPASDFYFNGTIDGVELVIESVTGDSFFTIGGQSGRYSNVYPIRGTGTPEGVVSAPVGSQFMDLAGSAGNVRFLKESGTGNTGWVSA
Physico‐chemical
properties
protein length:689 AA
molecular weight: 73526,00220 Da
isoelectric point:4,53845
aromaticity:0,09724
hydropathy:-0,25893

Domains

Domains [InterPro]
Coil
Unmapped
1–21
Coil IPR012334
DC_0090
STR
1–684
DC_0090
IPR011050
STR
275–510
IPR011050
IPR006626
Unmapped
345–367
IPR006626 IPR006626 IPR006626 IPR006626
CAM0106890.1
1 689
Architecture
STR
STR 1-684 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAM0106890.1
1 689
Domain Start End Length (AA) Confidence
N-terminal 1 240 240 0,9960
Central domain 241 631 392 0,9876
C-terminal 632 689 57 0,9548
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-240
Central
241-631
C-terminal
632-689

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 98E28-3
[NCBI] 		3109694 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAM0106890.1 [NCBI]
Genbank nucleotide accession
OZ196834.1 [NCBI]
CDS location
range 31281 -> 33350
strand +
CDS
ATGAGCGATTTAGACAACGCTATAAAATCAATTAACGAGTCAGCAGTAAAGGCAGAAAATACCGCTGGCTTTTTGGATGACATGTCGACGTTTGACGATCAATCAAGCGTAACCAACCCAAATAACGGGCAAATTGTTGCATCTATTCCCAAGCAAGTGAAAGATCGTACGGATGAATTATTTGCTGCTGCTGAGTCCGATATCAATCAAGCGGTGTCTGACGCAGCACAAAGCGCGACAGATGCGCAAGATGCTGCGAATAGTATTGGAAGATATCAAGGGTTGTGGCCAGATTCTGGTGGTAGCGCATTAAAGGGCGACACATATCAAACTCAAGTTAGCGGGGTTGAGACAGGTAAATATTTTACAGCGCTGCAAAACACAACGGTCGATCCTATTGATGATGATGTTAATTGGCGTGCAATTCTTAGTAACCAATCTTTGGGCGGCCTAACAAGCTACCAAGCTGCTAATGTTTCGGATATGATTGCTGGTAGAGTTATAAGCGGTGAGGTTATTCCTCATGCTGACGGTCAGGTGTGGGAGTGGGCTGGATATTACTCACCCAACGACGGGGGTGGTAATAAAGGCGTTGTGAAATTAGGTTCTCATACTGAAGATAATGGAATTATATTTAGTATAGACTCCAACACATACGTAGAAGCCGATACAAAAGATGGAATAAACGTTCTTCAATTTGGTTTGATTCCATCCGACCACACCACGACGGACAGAGCACAAGCTGCTTATAACTCTGGAGTATCAAAGGTTAAGTGGCCTAAAAGAGATTATATCATTGACGCAGTCTTAAACGGGCTTAATGGGATACTTGTAAAAAGCAACACGACAACCATTATCGACGCAGGATCAACCCTTACTGCATTTGCCCCAGGCGCTGCGGAGTACGCAATACTAGATGCAATACAACAAAGCAATGTTTTCTTTTATGTTGAAGGTGTTGAGTTTATAGGGGATCGAAGTACTCATACAGGAACGATAGGTGAGCAAGGTTTCGGCATACGGATCGGCGAGTGTGACAGATACGTGATTCGTGGTGGCACTTATCGTGATTTCTGGGGGGACGGCTTATTTATCGGTAAGTTCGGCGCTCCTGGAAGCCCTCCATCAACAAATGGGTATATTCGAGGGGTTCTATGTGACAACAACCGTCGACAAGGTATGTCTATTGTTGTTGCTAATGGTCTAGTTGTTGAAGATTCAAAATTCCTAAATAGCAACGGAACATCACCAGAGTCAGGAGTTGATTCAGAGCCTAATCTTAACGATCTCCCTAACTACAACATAACGTTTAGGAACTGCGAATTTAGCGGAACGGGCGGCGGTTTTAACGCCCCATTCTCCGATGGAACCAGTGATTTTCACTTCTACAAATGCATATTCAATGGCAAGGCAAATCAAGCGCTGATTGGGGATGCTCTTCAATTTAGGTCTGATGGGCTGCATGGGATTAGTACATTTAATGAATGTACGTTTAACGGGATTGTTAGGGAGGCTGAAAACGCAATATTTACCCATTGCGAATTCATAGCGGGAGATGAATATTTGCAGACGGTATGGGTGTTCTCATGCACCAACGACACAGTGGTTAAGTTAATAGATTGCACGATACTTGCTAAGGGCGAGAAAAGACCACTAAGTGAAGGTGGTAGCACGCTGCCCACTACGGGTAAAAAGTTTGTTAGAACACGGTTTATTAAGCAGGGCGATCAAGGTGCCTTATTTGCTGTAAATCACTCGTCAGGTTATTCGACATATACAGATTGTGAATTAATCCATCAAGGCACAGTCCCTGCTTCGGACTTTTACTTTAACGGAACAATCGATGGCGTTGAATTGGTTATTGAATCTGTCACTGGCGATTCATTCTTTACGATTGGGGGTCAATCAGGCAGATACTCCAATGTATACCCAATAAGAGGAACAGGGACACCAGAGGGTGTTGTTTCGGCCCCAGTTGGTAGTCAATTTATGGACTTAGCAGGGTCTGCTGGTAATGTTAGATTTCTAAAAGAATCAGGAACAGGAAATACAGGGTGGGTGTCGGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
a017bcd990e45857459715f22c8a1187120694a0ee2bd75185bcbde15a733eeb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8329
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50