Protein

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Genbank accession
CAB4166636.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MLVVTSLLGTNMAIYRGPGGPGDATADQANTAQLALTYANQSAASAAAAAASAQSTIDFTTDLDVAASSLPAGSTPTVSYNSTTVSLSFGIPDGTTGPAGPPGPSGPTGANGPTGPTGPAGSTGPSGPPGPTGPTGLTGPTGPTGPTGPTGPSGSAATIAVGTTTTGPAGGSASVTNSGSSSAAVFDFTIPTGPTGPTGPTGPTGPTGTTGPTGAPGPTGPTGTTGPTGPTGSPGPTGSPGPTGPTGPTGPTGPTGPTGPGVPTGGTINQVLQKNSSTNYDTSWVTLSTGTSVNISNDTSTTSDLYPTFLGSTTGTASTIYTGNAKLLYKPSTGEFKSEVPVAQNGIFVNAQTIDTSYTIGTGFNGMSSGPVTVASGVTVTVDTGANWAVSPPGGGGVTTGKAIAMAIVFGG
Physico‐chemical
properties
protein length:412 AA
molecular weight: 38567,47940 Da
isoelectric point:4,05003
aromaticity:0,04612
hydropathy:-0,14223

Domains

Domains [InterPro]
IPR050149
93–261
IPR050149
IPR008160
97–152
IPR008160 IPR008160
G3DSA:1.20.5.320
232–290
G3DSA:1.20.5.320
CAB4166636.1
1 412
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4166636.1 [NCBI]
Genbank nucleotide accession
LR796782 [NCBI]
CDS location
range 21540 -> 22778
strand -
CDS
ATGCTGGTGGTTACATCCCTACTTGGTACTAACATGGCGATATATCGTGGTCCCGGTGGTCCCGGCGATGCAACAGCCGATCAAGCAAACACAGCACAGTTAGCACTTACTTATGCTAACCAGTCGGCTGCTAGTGCTGCTGCTGCGGCGGCATCTGCTCAGAGTACCATTGACTTTACTACCGATTTAGATGTAGCAGCCTCTTCGTTGCCTGCTGGCTCTACACCGACTGTATCGTATAACTCTACAACTGTTTCGCTGTCCTTTGGTATTCCTGACGGTACTACTGGCCCCGCTGGTCCCCCAGGCCCGTCTGGCCCTACTGGTGCTAACGGCCCCACTGGACCGACTGGCCCAGCAGGTTCTACTGGCCCATCAGGACCGCCCGGACCTACTGGACCTACAGGATTAACTGGTCCTACAGGCCCGACTGGACCAACAGGCCCTACAGGCCCATCTGGTTCAGCAGCTACGATTGCTGTAGGAACCACAACTACAGGCCCTGCTGGTGGTAGTGCATCTGTAACCAACAGTGGTTCGTCTTCTGCGGCGGTCTTTGACTTTACTATTCCGACTGGTCCTACTGGCCCAACAGGACCTACAGGGCCAACTGGACCGACTGGTACGACAGGACCCACTGGTGCTCCTGGACCTACAGGGCCAACGGGTACAACTGGTCCTACAGGGCCTACCGGCTCCCCTGGCCCGACTGGTTCACCCGGACCTACAGGTCCTACAGGTCCAACAGGGCCTACTGGACCGACTGGCCCCACTGGTCCTGGTGTACCTACTGGTGGTACAATTAACCAAGTACTACAAAAGAATAGTTCTACTAACTATGACACTTCTTGGGTTACGCTTTCAACTGGCACATCAGTAAACATTTCTAATGATACAAGTACAACATCTGATCTGTATCCTACATTCTTAGGATCAACAACTGGTACTGCATCAACAATTTACACAGGCAACGCCAAGTTACTTTACAAGCCCTCAACGGGCGAGTTTAAGTCTGAGGTTCCAGTAGCGCAGAATGGTATCTTTGTAAACGCTCAGACGATTGATACAAGCTACACGATTGGTACAGGTTTTAATGGTATGAGTTCAGGCCCTGTGACTGTTGCTTCTGGTGTAACGGTGACAGTTGATACAGGGGCTAACTGGGCAGTTTCTCCTCCCGGTGGGGGTGGTGTAACAACAGGTAAAGCGATAGCTATGGCTATTGTATTCGGAGGATAA

Tertiary structure

PDB ID
151664ccf5ab926ec36a2f9e56d08a5e91e8863cca8935971c6aab6f4441a9ec
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6540
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50