Protein

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Genbank accession
YP_009190734.1 [GenBank]
Protein name
tail collar fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,67
Protein sequence
MAQNNYNHYSDLAKYTIFDPTNTQWPVAIKDVQSALELIGSWARTDTGLPVASPTVAGVIRTATQAEVDAGTIGNAAVTPATLKSTVTRPEATTAVLGLTRYATNTEAAALTAGNRTITAAALGHVFKTVKAQENVDGTVRLTTAAQAQAGTDETTAVTPKRVVEMIGKFSVSPPSYTSATESNLGLVRVATQAQVAAGAVHDGYAVTPKTFMASKASDSVFGIVKFAKDSDVASATSNNLAVTPKSLQALKSTKDKYGLTRLSGSPTTDASLAAAATDAVFKTRRINGKTLDNDITITNNDINCYTRQESDGRYMPAGTRVGNVTWVEGQSWISRGATFTCNAPWEASSRLALNVNVKFERNNDGYDNRIFRFVVIVNGSQWGGELTLNIENTKGGRNGHSWRFEAYASSNFFFNNIPPNATVQIRPTEDSRIVFYDCMLTFCTNRP
Physico‐chemical
properties
protein length:448 AA
molecular weight: 48031,08710 Da
isoelectric point:8,89266
aromaticity:0,08036
hydropathy:-0,25402

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage JD18
[NCBI] 		1698360 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Jiaodavirus
Host Klebsiella
[NCBI] 		570 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009190734.1 [NCBI]
Genbank nucleotide accession
NC_028686 [NCBI]
CDS location
range 78982 -> 80328
strand +
CDS
ATGGCCCAGAATAACTATAATCACTACAGTGATTTGGCCAAATATACGATATTTGACCCAACAAATACACAATGGCCTGTTGCTATAAAAGACGTCCAATCAGCGTTAGAGCTGATTGGTAGCTGGGCAAGAACTGATACCGGATTACCTGTAGCATCTCCTACAGTAGCCGGCGTAATTCGCACAGCAACGCAGGCTGAAGTTGATGCTGGAACTATTGGTAATGCTGCGGTAACTCCTGCTACATTAAAATCCACAGTTACCCGTCCTGAAGCAACTACAGCAGTTCTTGGCTTAACACGGTATGCTACTAATACTGAAGCCGCAGCATTAACCGCAGGAAATAGAACTATTACCGCGGCGGCTCTCGGTCATGTGTTTAAAACTGTGAAAGCCCAAGAAAACGTAGATGGAACTGTTAGGTTAACTACTGCGGCTCAAGCACAAGCAGGAACTGACGAAACTACCGCAGTAACTCCTAAGCGTGTTGTAGAAATGATTGGAAAGTTCAGTGTCAGTCCTCCTAGTTATACCTCTGCGACAGAAAGCAACTTGGGATTAGTTCGTGTCGCAACCCAAGCCCAGGTAGCAGCAGGTGCTGTTCACGATGGATACGCAGTAACTCCAAAAACCTTCATGGCATCAAAAGCGTCTGACAGTGTATTTGGTATAGTAAAATTTGCTAAAGACTCAGATGTGGCTTCAGCTACTTCTAACAATTTGGCTGTTACTCCAAAAAGTCTTCAAGCGCTAAAATCCACCAAGGATAAATATGGATTAACCAGATTATCAGGTTCTCCAACTACTGATGCTTCATTGGCAGCGGCTGCAACAGATGCAGTCTTTAAAACCCGTAGAATAAACGGAAAAACCCTTGATAATGACATAACAATTACTAATAATGATATTAATTGTTATACAAGACAAGAATCTGACGGGCGTTACATGCCAGCTGGAACCAGAGTAGGTAATGTTACTTGGGTTGAAGGACAATCTTGGATTAGTCGAGGTGCAACGTTTACATGTAATGCACCATGGGAAGCTTCTAGTAGATTAGCTCTAAATGTTAATGTAAAATTTGAGCGTAACAACGACGGATATGACAATCGTATTTTCAGATTTGTTGTAATAGTTAACGGTTCCCAATGGGGCGGTGAACTTACTCTTAACATCGAAAATACTAAAGGCGGACGAAATGGTCATTCATGGAGATTTGAAGCTTACGCATCTAGCAACTTTTTCTTCAATAACATTCCTCCAAATGCCACTGTTCAAATAAGACCAACAGAAGACAGTCGTATTGTATTTTATGACTGCATGCTTACATTCTGTACAAATAGACCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a04445e80ba7af5bfc112e307b5a85dedc588ba318e6427d4a2bf0403df87a1f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7042
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of JD18-a novel lytic bacteriophage for Klebsiella pneumoniae Fan,J., Zhang,X., Guo,X., He,P. and Zhang,Y. 2023-10 — GenBank