Protein

View in Explore
Genbank accession
YP_010731727.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
Protein sequence
MPAVLPVIAIAVAAVVGTTTALVIGTIVAVGLTLAMSRNMSGVQSSPNPVGTTYQTNPLSLTFQADAPRRMVYGKARISGVVSYANVSGDGYEYLWMVVVIAAHRIQEVTQIYFDGEAGPDVAAGWYEWWYYDGSQTAVDPQLHATFSEYTADCILTGCAYAVVKLKYDKTAWKNGRPNVQFDVKGKPVYDPRDGLTKWTNNGALCTADFMTSVDGLGATSAEMDWETVKAAADISDQIPASMAASLCDGRYTIDGVVELSTKNGDTISQMLSACAGTVVWTEGVYRLFVGAARTAVSRQITAEDLRDNPSLQPRTPTDQSFNSVKGTFLDSTNGWVFNDFPPVSGAEYIAQDGGIQQFKDIVLNFTTSPITAQRLATIFLRRARLEKTITLPCKWTVFNYEVWDVVPLNLPQLGWISKLFQITDWKMTPPTNTDPGGIELTLVEYSDDIYSDDMDLKPIDGGGQIIVPDVTQPKPLSVLYATSGVTAVEPGTNKPRVRFDWPQSADIYVVGYELAYGKYPFTPVDSDYIFMSGRTTITYTTPPLGAGDTYIGYIRTVNSYEKRSTTTPSNTVVVVGLGSEYPEAVQSLTFNVVDSLYGDLAWSAPLPGSLAASTVIVWAKSIEDYEQGVIVATIPLPQTTLRVQREIQDGVYFAAFVSDAGMVGVPASVAATGRPPATIVKQTGFSKYEGDLINGVWVTPYKAVVDSQQLAASLGWEVFDMMVPAPFGQCEYWSKDATYQAPPATLRVSGSVGWLRSPNIPGVLPTLNASAQVAHFDNTEYQQGQFVLTGDANIKLGFRATVTDPQGVQFLGLNSTLEKL
Physico‐chemical
properties
protein length:821 AA
molecular weight: 88995,55600 Da
isoelectric point:4,63337
aromaticity:0,10475
hydropathy:-0,02266

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Halfdan
[NCBI] 		2234092 Uroviricota > Caudoviricetes > Halfdanvirus >
Host Escherichia coli str. K-12 substr. MG1655
[NCBI] 		511145 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010731727.1 [NCBI]
Genbank nucleotide accession
NC_072811 [NCBI]
CDS location
range 721 -> 3186
strand -
CDS
ATGCCCGCCGTACTTCCCGTAATTGCAATCGCCGTTGCGGCCGTGGTCGGTACGACGACCGCGCTTGTTATCGGTACGATTGTCGCCGTCGGCTTAACGCTGGCAATGTCGCGCAATATGTCCGGGGTTCAATCGTCACCGAACCCGGTTGGTACGACGTACCAGACGAACCCGTTATCGCTTACCTTTCAGGCCGACGCCCCGCGCCGTATGGTCTATGGGAAAGCGCGGATTTCTGGCGTCGTTAGTTACGCCAACGTATCCGGCGACGGTTACGAATATCTTTGGATGGTCGTTGTAATTGCGGCGCACCGAATCCAAGAAGTTACGCAAATCTATTTCGACGGCGAAGCCGGGCCGGATGTTGCGGCGGGCTGGTATGAATGGTGGTATTACGACGGTTCGCAAACCGCCGTTGACCCGCAGTTGCACGCGACTTTCAGCGAATACACCGCCGATTGCATTTTGACCGGTTGCGCGTATGCGGTCGTTAAGCTGAAATACGACAAAACCGCTTGGAAGAACGGCCGCCCTAACGTGCAATTCGACGTTAAGGGTAAACCGGTATACGACCCCCGCGACGGCTTGACCAAGTGGACGAACAACGGTGCGCTTTGCACCGCCGACTTTATGACTTCGGTAGACGGCTTGGGCGCAACTTCCGCCGAAATGGATTGGGAAACCGTTAAAGCCGCCGCCGACATTTCCGACCAAATCCCGGCAAGCATGGCCGCCAGTCTTTGCGACGGCCGATATACAATCGACGGTGTTGTCGAACTTTCGACCAAGAACGGCGACACAATTTCGCAAATGCTTTCGGCTTGTGCCGGTACTGTCGTATGGACGGAAGGCGTCTACCGCCTGTTTGTCGGTGCGGCCCGTACCGCCGTTTCGCGCCAGATTACGGCCGAAGACTTGCGGGATAATCCGTCGCTTCAACCGCGCACGCCGACCGACCAATCGTTTAACAGCGTCAAGGGTACTTTCCTTGATTCTACGAACGGTTGGGTATTTAACGACTTCCCGCCAGTATCCGGCGCTGAATATATCGCACAAGACGGCGGTATTCAGCAATTCAAAGATATTGTGTTGAACTTCACGACTTCGCCGATTACGGCGCAACGACTGGCAACCATTTTCTTACGCCGTGCGCGGCTGGAAAAGACGATTACCCTTCCGTGCAAATGGACGGTATTTAATTACGAAGTTTGGGACGTTGTACCGCTGAACTTGCCCCAACTTGGTTGGATTTCGAAGCTGTTTCAAATTACCGATTGGAAAATGACGCCGCCGACCAATACCGACCCCGGCGGCATCGAACTAACGCTAGTTGAATACAGCGACGACATTTATTCCGACGATATGGACTTAAAGCCGATTGACGGCGGCGGTCAAATCATCGTACCAGATGTTACCCAACCGAAGCCGTTGTCGGTTCTGTACGCGACTTCGGGCGTTACCGCTGTCGAACCGGGCACCAACAAACCCCGCGTTCGCTTTGACTGGCCGCAATCCGCCGATATTTACGTCGTTGGTTACGAACTGGCTTACGGCAAGTATCCGTTTACGCCTGTCGATTCCGACTATATCTTTATGTCGGGTCGCACGACGATAACGTATACAACGCCGCCGCTTGGCGCTGGCGACACGTATATCGGCTATATCCGAACCGTGAACAGTTACGAAAAGCGTTCTACGACTACGCCTTCGAATACGGTTGTCGTTGTCGGCCTTGGGTCTGAATACCCGGAAGCCGTCCAATCGCTGACCTTTAACGTTGTCGATAGCCTGTACGGCGACCTTGCTTGGTCGGCCCCGCTTCCGGGTTCGCTGGCGGCTTCGACGGTCATTGTGTGGGCAAAGTCGATTGAAGATTACGAACAAGGTGTTATCGTTGCGACGATTCCGCTTCCGCAAACGACGTTGCGCGTTCAACGCGAAATTCAAGACGGCGTTTACTTCGCGGCGTTCGTATCCGACGCGGGTATGGTCGGCGTTCCGGCAAGTGTTGCGGCAACCGGTCGCCCGCCCGCTACTATCGTCAAGCAAACCGGTTTTAGCAAGTACGAAGGCGATTTGATTAACGGGGTTTGGGTTACGCCGTACAAAGCGGTTGTCGATTCGCAACAACTGGCGGCGTCGCTTGGTTGGGAAGTGTTCGATATGATGGTTCCGGCACCTTTCGGCCAGTGCGAATACTGGTCTAAAGATGCGACGTATCAGGCACCGCCCGCAACCCTTCGTGTATCCGGTTCGGTTGGCTGGCTTCGTTCGCCAAACATTCCGGGCGTATTGCCGACTTTGAATGCGTCGGCGCAAGTGGCGCATTTCGATAACACCGAATACCAACAAGGGCAATTCGTGTTAACCGGCGATGCGAATATTAAACTTGGTTTCCGGGCTACCGTTACCGACCCCCAAGGCGTACAATTCTTGGGCCTTAATTCGACGTTGGAGAAACTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
32b8b78e99b2a827afcf807ec37e741c73da23b57615d5336eba791086bc6d31
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7773
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Exploring the Remarkable Diversity of Culturable Escherichia coli Phages in the Danish Wastewater Environment Olsen,N.S., Forero-Junco,L., Kot,W. and Hansen,L.H. 2020 — GenBank