Protein

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Genbank accession
WPK33101.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSLRPIVSKGYSQTRGSNIWRTEVQGGVPRQGRDTYFEPVPISVTLVVSSLGRQAFYSFLNNIDGGASSFIMPHDTGLGIEDHHVLITSTISDSTDDGKNWVITFTATAERTAIQEDTCFTKNLPDLFGCYGDYLGSFLKIYANYQTTFPRIWSNEGPAGYPPINLLASTLDSRIVYDGPQVYYINRNGNLVQSAVNEWPLTFIDGVAVGRVPPEAASENIIIESSDITDASWTKQRTTSSYDGSLASSFAITPNEDTGVHTVSQTVSAQILEGEKYTFSVFFKANGYDFARLRAANQDTTHISSAIVDLTSGAIVAGEAYSTITSIGGGWYRATETVTGPSGGFSGLNLAVWVYQTATVSSFAGDGVSGIIVSSPQIEKGEFSTSPIVTDASPVARPMASAKVIMNGATSIDITYSDGSMVNVPAVGDYATIPQADSAWGSKYITRIDFNVDG
Physico‐chemical
properties
protein length:454 AA
molecular weight: 48657,38520 Da
isoelectric point:4,60381
aromaticity:0,10352
hydropathy:-0,08811

Domains

Domains [InterPro]
DC_0353
STR
42–454
DC_0353
NF048003
Unmapped
215–398
NF048003
WPK33101.1
1 454
Architecture
STR
STR 42-454
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage AV104
[NCBI] 		3077250 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK33101.1 [NCBI]
Genbank nucleotide accession
OR352935.1 [NCBI]
CDS location
range 16980 -> 18344
strand +
CDS
ATGTCCCTTCGACCTATAGTGTCGAAGGGGTACTCCCAAACGCGAGGAAGTAATATCTGGCGTACAGAAGTTCAGGGCGGTGTGCCTCGTCAGGGGCGTGATACATACTTTGAGCCGGTGCCGATTAGCGTTACCCTGGTTGTGTCGTCACTAGGCCGCCAGGCTTTCTATAGCTTTCTGAATAACATAGACGGCGGGGCGTCTTCGTTCATCATGCCTCACGATACCGGTTTAGGTATCGAGGACCACCATGTACTCATCACATCGACGATTAGTGACAGCACCGACGACGGCAAGAACTGGGTAATCACGTTCACTGCTACGGCAGAGAGAACAGCGATTCAGGAAGATACATGCTTTACGAAGAATCTGCCAGATTTGTTCGGTTGCTACGGCGATTATTTAGGTAGTTTTCTGAAAATATACGCGAACTATCAGACGACGTTCCCACGCATCTGGAGCAATGAAGGGCCCGCCGGATACCCGCCGATTAACCTTCTGGCGTCGACTCTTGATAGCCGCATTGTGTACGACGGGCCACAGGTTTATTACATCAACCGAAACGGTAATCTTGTGCAGTCCGCCGTAAATGAATGGCCCCTTACGTTTATTGATGGGGTTGCTGTCGGACGTGTTCCCCCTGAAGCCGCATCTGAAAACATAATAATTGAATCTTCAGACATTACCGATGCATCGTGGACCAAGCAGAGGACAACATCCAGTTACGACGGGAGCTTGGCTTCATCTTTCGCTATTACCCCAAATGAGGACACAGGGGTACACACAGTTAGCCAGACCGTTTCCGCACAGATTTTAGAAGGTGAAAAATACACATTCAGTGTATTTTTTAAGGCGAATGGGTATGATTTCGCCAGACTCCGCGCGGCAAATCAGGACACTACGCACATCTCTTCCGCGATAGTAGACCTTACATCCGGGGCCATTGTAGCTGGCGAAGCATACTCCACAATAACATCTATAGGAGGCGGATGGTATCGGGCTACTGAAACAGTAACTGGTCCGTCGGGTGGGTTCAGTGGCTTAAATCTGGCGGTATGGGTTTACCAAACAGCGACCGTATCATCGTTTGCTGGCGATGGTGTAAGCGGCATCATCGTGTCCTCACCTCAAATAGAAAAAGGCGAGTTCTCCACATCGCCAATAGTAACCGATGCGTCACCGGTAGCAAGACCTATGGCATCGGCAAAAGTAATCATGAACGGCGCAACAAGCATCGACATTACCTACTCTGACGGCTCCATGGTGAACGTTCCGGCGGTTGGAGATTACGCTACCATCCCCCAAGCGGATTCTGCGTGGGGTAGTAAATATATCACTCGTATTGATTTTAATGTGGACGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ac2e3eb63722598546eda917d72e8222d3d0ddb5a5fab0299d4f702634af3113
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8879
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A collection of diverse bacteriophages for biocontrol of ESBL- and AmpC-beta-lactamase-producing E. coli Vitt,A.R., Sorensen,A.N., Bojer,M.S., Bortolaia,V., Sorensen,M.C.H. and Brondsted,L. 2023 — GenBank