Protein

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Genbank accession
ATI16343.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAKVSGSYESVVRGVSEQVPQDRRPGQHKAQMNMISDPVRGLARRHGSVMMQEKVLAAADDTKWAAWLADTSQHKSFPFFIGGVEYDLLYRTQAWAGGAVSSDTTFLMAFNKDSKQFLPVVAHSDTATLKSGGVSAIVNVGKYIFLAGNTIVPTFVGTDRWNSTANLQKLAVWVRGGNYSRTYKVTLLKTDNTKVTVSYKTKSSTYPNLLDTSDIPASASDYQKQVNDRVNAYNGQVTKWIGDAVEDITPANIATKLAAALTTAGITGCTTVGATLCIDNASIVECSVEDGGDGTLLYGVGKDVVNVDKVSATHWPGKIVRVRPKKNNGKDSLYLEALAKDGSTGAFTEVTWRECAGYTMQPVAPFCIATVKSGTLYVAATPATLTSLTGDAAPTFKVNEVGDDITSPLPYFINKKIDYLGLFQDRLVIGSGAVLLFSRPGDYFNWFRSSVLTKQDDDPIEIYALGAEDDIIKYSTTYDRNMFLFGKRKQYSVNGRQPLTPSSANIVVSASHEDATDAAPQNSGNFVFYCKTRNGLTSVHQVQQGQLADTPESFNISQQLDSYIKGKPVEIVATTAPNTVFVRTTAERNVLYTYAYLDTPAGNERLFDSWSKWGWHAGLGSIVGMSRYDGDLYVYMLRRGLDDDGVDRVWLAAERFVLDTGLSPMPYADSLRPITSALTPGPNTFLHVGQAIISDTWVAFPKTSAKPFIGVPWSKLSEFQEQYPAYAEAYVGVDYSEDTFVTPTNPYMRDKNGRAIVNGRLTLGRLNIGVADTGGLVVTLSRQDQTSVSTNFNGRLLGRASDLVGSQPIVTTSVPAVVGREVREVEYTIAAKSFLPLTITAIEWTGQYFNNVPRV
Physico‐chemical
properties
protein length:855 AA
molecular weight: 93222,96170 Da
isoelectric point:6,54816
aromaticity:0,09942
hydropathy:-0,19170

Domains

Domains [InterPro]
IPR058003
TTP
1–53
IPR058003 IPR058003
DC_0058
STR
1–855
DC_0058
ATI16343.1
1 855
Architecture
STR
STR 1-855
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ATI16343.1
1 855
Domain Start End Length (AA) Confidence
N-terminal 1 167 167 0,6103
Central domain 168 366 200 0,2840
C-terminal 367 855 488 0,3964
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-167
Central
168-366
C-terminal
367-855

Taxonomy

  Name Taxonomy ID Lineage
Phage Caulobacter phage Lullwater
[NCBI] 		2024607 Uroviricota > Caudoviricetes > Autographivirales > Lullwatervirus > Lullwatervirus lullwater
Host Caulobacter crescentus
[NCBI] 		155892 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Caulobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATI16343.1 [NCBI]
Genbank nucleotide accession
MF621978 [NCBI]
CDS location
range 25980 -> 28547
strand +
CDS
ATGGCTAAGGTTTCCGGTTCTTACGAGAGCGTCGTAAGAGGCGTCTCGGAGCAAGTTCCGCAAGACCGCCGTCCCGGCCAGCACAAAGCACAGATGAACATGATCTCTGATCCTGTGCGCGGGCTTGCCCGTAGGCACGGTTCTGTCATGATGCAAGAGAAGGTTCTTGCTGCTGCTGACGATACCAAGTGGGCTGCATGGCTTGCTGATACGTCACAGCACAAGAGCTTTCCCTTCTTCATCGGTGGTGTAGAGTACGATCTGCTATACCGTACCCAGGCTTGGGCTGGTGGCGCAGTAAGCTCTGATACTACGTTCCTTATGGCTTTCAATAAGGACAGCAAACAATTTCTTCCGGTTGTCGCGCACTCGGATACTGCCACCCTAAAGAGCGGTGGGGTAAGTGCGATTGTCAATGTCGGAAAGTACATCTTCCTTGCGGGGAACACCATTGTGCCAACGTTCGTCGGTACGGATAGGTGGAACTCTACAGCCAACCTTCAGAAGCTGGCTGTATGGGTGCGCGGTGGGAACTACTCCCGCACGTACAAGGTAACCCTGCTTAAGACGGATAACACCAAGGTTACCGTCAGCTACAAAACTAAGTCGTCTACCTACCCTAACCTACTAGACACCTCGGACATTCCTGCTTCTGCTAGCGATTACCAGAAGCAAGTCAACGATCGGGTCAACGCCTATAACGGGCAAGTGACCAAGTGGATCGGGGATGCCGTTGAGGACATCACTCCTGCTAACATCGCTACCAAGTTAGCTGCTGCCTTGACTACCGCCGGTATTACTGGCTGTACAACGGTAGGGGCAACTCTGTGTATCGACAATGCTAGTATTGTGGAGTGCTCGGTAGAAGACGGCGGGGATGGTACCTTACTCTACGGCGTTGGTAAAGACGTCGTCAACGTTGACAAGGTTAGCGCAACTCACTGGCCGGGTAAGATTGTGCGGGTACGCCCAAAGAAGAATAACGGGAAGGATAGCCTCTATCTGGAGGCGCTTGCTAAAGACGGTTCTACCGGTGCCTTTACGGAGGTAACTTGGCGAGAGTGCGCTGGCTACACCATGCAGCCTGTTGCTCCCTTCTGCATTGCTACGGTGAAGAGCGGTACACTATATGTGGCTGCTACGCCTGCAACGCTGACTTCTTTGACCGGAGATGCGGCACCTACGTTTAAGGTGAACGAGGTTGGAGACGACATTACGTCCCCTCTTCCGTATTTCATCAACAAGAAGATTGATTACCTCGGCCTGTTCCAAGACCGTTTGGTCATAGGCTCCGGGGCTGTGCTCCTGTTCTCTAGGCCTGGGGATTACTTTAATTGGTTCCGTTCGTCTGTGCTTACAAAACAGGATGACGACCCGATTGAGATTTACGCCCTCGGTGCCGAAGACGATATCATTAAGTACAGCACCACATACGACCGGAATATGTTCCTGTTTGGTAAGCGTAAGCAGTATAGCGTTAACGGGCGTCAGCCTCTTACGCCTAGCTCTGCCAACATCGTGGTCAGCGCCTCTCACGAGGACGCCACGGACGCTGCCCCTCAGAACTCTGGTAACTTCGTGTTCTACTGCAAGACGCGTAATGGGCTTACCTCTGTACACCAAGTGCAGCAGGGTCAGCTTGCCGATACCCCGGAAAGCTTCAACATCTCTCAGCAACTCGACAGCTACATCAAAGGTAAGCCTGTTGAGATTGTAGCTACCACGGCACCCAACACGGTGTTTGTGCGTACTACTGCTGAGCGCAACGTTCTCTATACCTACGCGTACCTAGATACGCCTGCCGGTAATGAGCGCCTGTTTGACAGCTGGAGCAAGTGGGGCTGGCACGCCGGGCTTGGGTCCATTGTTGGTATGAGCCGATACGACGGTGATCTCTACGTGTACATGCTGCGTCGAGGCCTGGATGACGATGGAGTTGACCGTGTCTGGCTTGCCGCTGAACGCTTTGTACTAGACACGGGCCTTAGTCCTATGCCTTACGCGGACAGCCTGCGTCCTATCACGTCTGCGCTCACTCCTGGGCCTAATACCTTCCTCCACGTGGGGCAAGCTATTATCTCAGATACATGGGTAGCCTTCCCCAAAACCTCTGCAAAGCCCTTCATTGGTGTGCCGTGGAGCAAGCTTTCAGAGTTCCAAGAACAATACCCAGCTTATGCCGAGGCGTACGTTGGTGTTGACTACTCGGAGGATACATTCGTCACGCCAACCAACCCGTACATGCGGGATAAGAATGGCAGGGCTATTGTTAACGGCAGGCTCACTCTAGGCCGCCTTAATATCGGCGTTGCTGATACGGGTGGTCTTGTAGTAACACTATCTCGACAGGACCAGACCAGCGTAAGCACGAACTTTAACGGGCGCTTGCTGGGCCGGGCTTCTGACCTAGTTGGTAGTCAGCCGATCGTAACTACCTCCGTTCCAGCAGTTGTTGGTAGGGAGGTTAGAGAGGTCGAGTATACCATCGCTGCTAAATCCTTCCTTCCACTGACCATTACCGCTATCGAGTGGACCGGTCAATACTTCAATAACGTTCCGAGGGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5b5c7c63167ee825418f211189e581a2e613edd1f8be3de5eb41d11f039f3cf2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8548
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
New Genera and Species of Caulobacter and Brevundimonas Bacteriophages Provide Insights into Phage Genome Evolution Ely,B., Hils,M., Clarke,A., Albert,M., Holness,N., Lenski,J. and Mohammadi,T. 2024 — GenBank