Protein

View in Explore
Genbank accession
QXV81626.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,72
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MISGNKGGSSKPYTPKEMEDNLISINKIKILLAVSDGEVDGEFSLKNLYLDDVPVQNADGSINYSGVSAEFRPGTQTQDYIKGFSDTSSEITIQRDLAQNNPYSIAVTNKSLSAIRIKILMPQGYKQEDNGDLVGVSVQYAVDMAVDGGSFQRVLTDTITGKTTSGYDRSQRIDLPAFNEQVILRVSRITPDSNTSRVVDAIRLQSYAEVVDAKFRYPLTGLVYVEFDSELFPTQLPNISIKKKWKLIKVPVNYDPDSRTYSGSWNGLFKTAWSNNPAWVLYDLITNQRYGLDQRELGIEIDKWSIYEAAQYCDQMVPDGKGGLEPRYLCDVVIQSQIEAFNLIRDICSIFRGMSFWNGESLSIVVDKPRDPSYIFSNDNVVNGDFQYTFASEKSMYTQCNVTFDDEQNMYSQDIEGVFDTEAALRFGHNPTSITAIGCTRRSEANRRGRWILKTNLRSTTVNFATGLEGMIPTIGDVIAIADNFWASNLTLNLSGRVMEVSGLQVFLPFRVDARHGDFILINKPDGKPVKRTISRVSADGKTIELNVGFGFDVKPDTVFAIDRTDLALQQYVVTGITRGDDTEQFTYSITAVEYDPNKYDEIDYGVNIDDRPTSIVNPGVMKAPENVQVSSYSRIVQGQSVETMVVSWDKVEYASLYEVQWRKDNSNWLNVPQTANKEVSVEGIYSGNYFVRVRSVSASGSTSPWSEIVSAALTGKVGEPSAPINLTASDDEIFGIRIKWGMPEGSGDTAYVELQQAPDVDGRASEENATLLTLVPYPQMEYWHATLPPGYINWYRVRSVDRIGNVSAWTDFARGMSSTNVDDILGDILDDILNSAGFDEFKENAVDTANKVKDQAQSVIQNALAIDTNLRWNRVENGKRKAEHGQALELIANETEARIQAVDILRTEFDEGISSGITEVKSLISNESETRAQQVQQLESTFTTEIGKTNANVSSAQQAIANETEARTQAVSSLDAKFSGQIDGVNQEIASNISQVNQAIANEASARSSADTALSTRIGNTESAVTQKLDSWIDNGQVGAQYALKLGIKSGGLEYTSGVSLSLVQTGSGVQSQFLVDAARFGVMTQQGGSYTLPFVVDNGTVIMNTALIKNGSITNAMIGNVIQSNDYVAGYSGWRLDKNGNLEINGRAGNGRLTINNNIIAVYDGNGVLRVRMGLF
Physico‐chemical
properties
protein length:1178 AA
molecular weight: 129662,04700 Da
isoelectric point:4,71442
aromaticity:0,08574
hydropathy:-0,31672

Domains

Domains [InterPro]
DC_0014
STR
1–1178
DC_0014
IPR053171
Unmapped
2–866
IPR053171 IPR015406
IPR055385
ATT
88–213
IPR055385 IPR032876 IPR036116 IPR013783
IPR013783
STR
623–716
IPR013783
IPR003961
STR
624–718
IPR003961
IPR003961
STR
624–712
IPR003961
QXV81626.1
1 1178
Architecture
STR
ATT
STR
ATT
STR
STR 1-87 | ATT 88-213 | STR 214-338 | ATT 339-491 | STR 492-1178
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXV81626.1
1 1178
Domain Start End Length (AA) Confidence
N-terminal 1 504 504 0,9149
Central domain 505 1059 556 0,0430
C-terminal 1060 1178 118 0,3609
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-504
Central
505-1059
C-terminal
1060-1178

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage JohannLBurckhardt
[NCBI] 		2851975 Uroviricota > Caudoviricetes > Drexlerviridae > Henuseptimavirus > Henuseptimavirus johannburckhardt
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV81626.1 [NCBI]
Genbank nucleotide accession
MZ501085.1 [NCBI]
CDS location
range 16223 -> 19759
strand +
CDS
ATGATAAGCGGCAATAAGGGCGGCTCCTCTAAGCCGTATACGCCAAAGGAGATGGAGGACAACCTGATCTCCATCAACAAAATCAAGATCCTCCTGGCGGTTTCAGACGGCGAGGTAGACGGCGAGTTTTCGTTAAAAAATCTCTATCTTGACGATGTGCCAGTGCAAAACGCAGACGGCTCGATTAACTATAGCGGTGTTAGTGCTGAGTTCCGGCCAGGCACTCAAACGCAGGACTACATTAAGGGGTTTTCCGACACGTCAAGCGAGATCACGATTCAGCGAGATCTCGCGCAGAATAACCCTTACAGCATTGCGGTAACAAACAAATCACTATCTGCTATCAGAATCAAAATCCTGATGCCTCAGGGCTACAAGCAGGAGGATAACGGCGATCTGGTTGGTGTATCAGTGCAATACGCGGTTGATATGGCTGTAGACGGTGGCTCATTCCAGCGAGTTCTGACTGATACGATCACTGGCAAGACAACAAGCGGCTACGACCGCAGCCAGCGAATCGACCTACCAGCATTCAACGAGCAGGTGATTTTGCGCGTTAGCCGAATCACGCCGGACTCTAACACAAGCCGAGTTGTTGACGCGATCAGATTGCAGAGCTATGCGGAGGTTGTTGATGCAAAATTCCGTTACCCTCTGACTGGTCTTGTTTACGTTGAGTTTGATAGCGAGCTTTTCCCGACTCAGCTACCGAACATTTCTATCAAGAAGAAATGGAAGCTGATCAAGGTTCCTGTTAACTACGATCCAGATTCGCGCACCTATAGCGGATCATGGAATGGTTTATTCAAGACGGCGTGGAGCAATAACCCTGCTTGGGTTCTGTATGATCTGATCACCAATCAGCGCTACGGACTCGACCAAAGGGAGCTTGGGATTGAGATCGACAAGTGGAGCATCTACGAGGCGGCGCAGTATTGCGATCAGATGGTTCCCGATGGTAAGGGCGGTTTAGAGCCTCGCTATCTTTGTGATGTGGTTATCCAGAGCCAGATTGAGGCGTTTAACCTTATCCGCGATATTTGCTCAATCTTTCGTGGTATGAGCTTTTGGAACGGCGAGAGCCTTTCCATTGTGGTGGATAAGCCGCGCGATCCGTCTTACATTTTCAGCAATGACAACGTGGTAAACGGCGATTTTCAGTACACATTTGCGAGCGAAAAAAGCATGTACACGCAGTGCAACGTGACTTTCGACGACGAGCAAAACATGTACAGCCAGGATATTGAGGGCGTTTTCGATACTGAGGCCGCTTTGCGTTTTGGTCACAATCCGACAAGCATCACCGCAATCGGATGCACACGACGCAGCGAGGCGAACCGCCGAGGGCGCTGGATTCTCAAGACCAACCTGCGCAGCACTACGGTAAACTTTGCAACTGGTCTTGAGGGCATGATCCCGACAATCGGAGACGTGATCGCAATCGCGGACAACTTCTGGGCTAGCAACTTGACGCTTAATCTTTCGGGGCGCGTCATGGAGGTTTCAGGGCTGCAAGTTTTCCTCCCGTTCCGAGTTGATGCGCGGCATGGTGATTTTATCCTGATCAACAAGCCGGACGGAAAGCCAGTTAAGCGCACTATTTCACGAGTTAGCGCAGACGGGAAAACTATTGAGTTAAACGTTGGCTTTGGTTTCGACGTTAAGCCGGACACGGTTTTTGCAATCGACAGGACTGATCTTGCGTTGCAGCAGTACGTTGTTACCGGAATCACCAGGGGTGACGATACGGAGCAATTCACGTACTCAATAACGGCGGTCGAATACGATCCAAACAAGTACGACGAAATTGATTACGGAGTGAACATTGACGACAGGCCAACAAGCATTGTAAACCCTGGTGTGATGAAAGCGCCTGAAAATGTCCAGGTGTCCTCTTACTCTCGCATTGTTCAGGGGCAGAGCGTAGAAACGATGGTTGTTAGCTGGGACAAGGTAGAATATGCAAGCTTGTACGAGGTGCAATGGAGAAAGGACAATAGCAACTGGCTAAACGTTCCTCAGACTGCAAACAAAGAGGTTAGCGTTGAGGGTATTTACTCAGGCAACTACTTTGTAAGGGTGCGATCTGTTTCTGCATCCGGCAGCACTTCCCCGTGGTCTGAGATTGTATCGGCGGCGCTGACAGGTAAGGTGGGGGAGCCAAGCGCACCAATAAACCTAACTGCCTCCGACGATGAAATTTTCGGGATTAGGATCAAATGGGGTATGCCAGAAGGATCAGGTGACACTGCATACGTAGAGCTACAGCAAGCGCCGGACGTAGACGGAAGGGCTAGCGAAGAAAACGCAACACTGCTAACTCTCGTTCCGTATCCTCAAATGGAGTATTGGCACGCAACGTTACCACCTGGATATATCAACTGGTATCGAGTTCGAAGTGTTGACAGGATCGGAAACGTTTCTGCATGGACTGACTTTGCGCGCGGTATGTCGTCAACTAACGTTGATGATATTTTAGGCGACATTCTTGATGATATTTTAAACTCTGCTGGGTTTGATGAGTTCAAAGAGAATGCCGTAGATACTGCAAACAAGGTTAAAGACCAGGCGCAAAGCGTGATCCAGAATGCGCTAGCTATTGATACCAATCTGCGCTGGAACCGAGTAGAAAACGGGAAGCGTAAAGCTGAGCACGGACAGGCGCTTGAGCTTATCGCAAACGAGACTGAGGCGAGAATCCAGGCGGTTGACATTCTCCGTACTGAGTTTGACGAGGGAATATCCTCAGGAATCACAGAGGTTAAATCCCTTATCTCTAATGAGTCGGAGACGCGAGCGCAGCAGGTGCAGCAGCTTGAATCTACGTTCACAACCGAGATCGGAAAGACAAACGCAAACGTGAGTAGCGCACAGCAAGCGATTGCAAACGAGACTGAGGCAAGGACTCAAGCGGTTAGCTCTCTCGATGCCAAATTCTCAGGGCAGATTGACGGCGTGAATCAAGAAATCGCGTCAAATATCAGCCAGGTTAACCAGGCGATTGCTAACGAGGCTTCCGCGCGATCCTCAGCAGATACGGCGTTATCTACTCGGATCGGAAACACTGAGTCAGCAGTAACGCAGAAACTTGACTCATGGATTGATAACGGTCAAGTGGGTGCTCAGTACGCGCTCAAGCTTGGGATTAAGAGCGGCGGCCTTGAGTACACCTCTGGTGTCTCATTGTCTCTTGTGCAAACTGGATCCGGCGTTCAATCTCAATTCCTGGTAGATGCGGCCAGGTTTGGGGTAATGACTCAACAGGGGGGCAGCTACACATTGCCGTTTGTAGTTGATAATGGAACGGTTATCATGAATACGGCGCTAATTAAAAACGGCTCTATAACCAACGCAATGATTGGTAACGTGATTCAGTCAAACGATTATGTTGCTGGTTATTCCGGTTGGAGGCTGGACAAAAACGGAAACCTTGAGATTAACGGCAGAGCCGGAAATGGCAGACTGACCATTAACAACAACATTATCGCGGTTTACGATGGTAATGGCGTCTTGAGGGTTCGAATGGGATTGTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
aac6593a0e4f4e6af958fcc4c963b9409c7fc966a9f0c918eb276ab53c542ac5
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2982
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Systematic exploration of Escherichia coli phage-host interactions with the BASEL phage collection Maffei,E., Shaidullina,A., Burkolter,M., Heyer,Y., Estermann,F., Druelle,V., Sauer,P., Willi,L., Michaelis,S., Hilbi,H., Thaler,D.S. and Harms,A. 2021 — GenBank