Protein

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Genbank accession
YP_009610331.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TSP
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MNILRSFTETVVTTPTDTFPISFEYDEKYDAVHVFLNDVAVEDLGYTVSQVNAVTLKVEPAIPEGTVRIERETDIDKMKYIFDAGALFIDQNVDADFKQIVHSQQEVRDGFIKLRGDVLPLVHGLQEALQQAQEASEAAQEAADAAEEAAQVARSADKIIDSSGLTQQDINDRLAITYPTAVGLVGKPNLKDADVIYVQSYSNIFDGGDGYYRVSADTTTVADGAYVIRINPNLIATMLNTTGSVDVARFGAVMNADVGPFIEKAFKYFRDVCLTKPYKLNTVVGIPNQNNYSKNVYYLRGLGDPEITVDCPSAVFTSASAKLDPTSTVNKFTAKIDVSNISFIGTTVANSVVFNGDRLYNINVHHNNFKGNITIFKAYVKREVGRQYTQSVSINHNHLTGVYRVIESDKSYNLDFSYNMCEACIGGIYVGVDAPWDPNNISLTIHRNLWEGSGMLLKTNGGIIGGTISANYFENNTFNDAGIEKCLISINRTGTGAGYASGLVISGNTFSGNGAIPDFVDVRYVNQSTESSSTSKTANVKPVVFIGNWSNSYLMTNFAGALLINNRCSNRNTMFNAYSPQEGRVTFASGYLDKPLSSMLSGNLLNLITLDTRPCFTAGYINTNFKTTFDVNVLFKTSGGINTASCSFKLDVFVYTPLGAGTPPKSNLKAVMSAFMQSDTNDIISTGVNETMKSVIGATPTMAVVNNGDGTYGIRLSPFTNASSPNWGAITSARIEYTYQGTLIASHTSTYSTANLLTIT
Physico‐chemical
properties
protein length:760 AA
molecular weight: 82507,58350 Da
isoelectric point:5,13508
aromaticity:0,09737
hydropathy:-0,10539

Domains

Domains [InterPro]
DC_0126
ATT
1–224
DC_0126 IPR011050 DC_1013
Coil
Unmapped
122–156
Coil cd20481
cd20481
STR
175–581
cd20481
YP_009610331.1
1 760
Architecture
ATT
STR
RBD
ATT 1-224 | STR 225-581 | RBD 582-760
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009610331.1
1 760
Domain Start End Length (AA) Confidence
N-terminal 1 258 258 0,9975
Central domain 259 568 311 0,9902
C-terminal 569 760 191 0,9832
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-258
Central
259-568
C-terminal
569-760

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_AbaP_B1
[NCBI] 		2016049 Uroviricota > Caudoviricetes > Autographivirales > Beijerinckvirinae > Friunavirus
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009610331.1 [NCBI]
Genbank nucleotide accession
NC_042003.1 [NCBI]
CDS location
range 34710 -> 36992
strand +
CDS
ATGAATATACTACGCTCATTTACAGAGACAGTGGTGACTACACCTACAGATACTTTCCCTATCAGTTTTGAATATGATGAGAAATATGATGCTGTACATGTCTTTCTTAATGACGTGGCAGTTGAAGACTTGGGGTACACGGTATCTCAAGTCAATGCTGTTACTCTAAAAGTTGAACCTGCTATTCCAGAAGGTACTGTTCGTATTGAACGCGAAACAGATATTGATAAGATGAAGTACATCTTTGATGCTGGTGCGTTATTCATTGACCAGAATGTGGATGCAGATTTTAAACAGATCGTACACTCGCAGCAAGAGGTACGTGATGGCTTTATTAAACTACGTGGTGATGTACTACCGCTTGTACACGGTTTACAAGAAGCTTTGCAACAGGCACAAGAAGCTAGTGAAGCTGCTCAAGAGGCAGCAGATGCTGCCGAGGAAGCTGCTCAAGTAGCCAGAAGTGCAGACAAGATTATTGATTCAAGTGGTTTAACCCAACAAGATATTAATGATCGCCTAGCAATTACATACCCAACTGCGGTAGGTTTAGTTGGTAAGCCTAACTTAAAGGATGCAGATGTAATTTATGTTCAGAGTTACAGTAACATCTTTGATGGGGGTGACGGTTACTATCGAGTGTCAGCGGATACTACTACTGTAGCCGATGGCGCTTACGTGATTCGTATTAACCCTAACTTAATTGCAACAATGCTCAATACTACAGGTAGTGTAGATGTAGCGCGGTTCGGTGCTGTAATGAATGCGGATGTGGGTCCGTTTATCGAGAAAGCATTTAAGTACTTCCGTGATGTGTGTTTAACTAAACCATACAAACTTAACACTGTAGTAGGTATACCTAACCAGAACAACTACTCTAAGAACGTTTATTACTTACGAGGTTTAGGTGATCCAGAGATTACAGTAGATTGCCCTAGTGCGGTATTTACGTCGGCTTCTGCAAAGTTAGACCCAACTAGCACAGTTAATAAATTTACAGCTAAGATAGATGTATCTAATATTAGCTTCATTGGTACGACTGTAGCCAATTCCGTAGTATTTAACGGTGATCGACTTTATAATATTAATGTACACCATAATAACTTTAAAGGTAACATTACTATCTTTAAGGCGTATGTTAAGCGCGAAGTTGGTCGTCAGTACACTCAAAGTGTCTCTATCAACCATAACCACTTAACAGGTGTATATCGTGTTATAGAATCTGATAAATCTTATAACTTAGATTTCTCTTATAACATGTGTGAAGCATGTATCGGTGGTATCTATGTAGGTGTAGATGCACCGTGGGACCCTAATAATATCTCTCTTACTATCCACCGTAACTTGTGGGAAGGTAGTGGTATGTTATTAAAGACTAATGGTGGTATTATCGGTGGTACTATCTCAGCTAACTACTTCGAGAACAATACCTTCAACGATGCAGGTATTGAGAAGTGTTTAATCAGTATTAATCGTACTGGTACGGGTGCGGGTTATGCAAGTGGTTTGGTTATCTCAGGAAACACATTCTCAGGTAACGGTGCTATCCCAGACTTTGTAGATGTTCGCTATGTCAACCAAAGTACGGAGTCGTCATCTACGAGTAAGACTGCTAATGTTAAACCTGTAGTATTCATTGGTAACTGGTCTAATAGTTACTTGATGACTAACTTTGCAGGTGCGTTGTTGATTAATAACCGTTGTAGTAACCGTAACACTATGTTCAACGCATACAGTCCTCAAGAGGGTCGTGTTACATTTGCATCGGGTTATTTAGATAAACCGCTATCCAGTATGCTCAGTGGTAACTTACTTAACTTGATTACACTTGACACTCGACCATGTTTCACTGCGGGTTACATCAATACTAACTTCAAGACTACATTTGACGTTAATGTGTTGTTTAAAACTTCGGGTGGCATTAATACCGCAAGCTGTAGTTTTAAATTAGATGTATTTGTATATACACCTCTAGGTGCTGGTACACCTCCAAAGTCTAACCTTAAAGCAGTTATGTCTGCATTCATGCAATCAGACACTAACGATATTATCAGTACAGGTGTTAATGAGACTATGAAGTCTGTTATAGGTGCTACACCTACAATGGCTGTAGTTAATAATGGTGACGGTACATATGGTATTCGTTTAAGTCCGTTTACTAACGCATCATCACCTAACTGGGGTGCTATAACATCTGCACGTATTGAGTACACTTATCAAGGTACTTTAATAGCGTCACATACTTCAACATATTCAACTGCTAACTTATTAACTATCACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
47d622f3ad50c4ec511aedb8a98b907e8bcdc1d19d6b3122dcfc2c823e43bed3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6584
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Sensitivity acquisition of phages to Acinetobacter calcoaceticus-baumannii complex species through exchange of pectate lyase domains Oliveira,H., Rita,A., Konstantinidis,N., Dotsch,A., Ferreira,A., Akturk,E., Nemec,A., Sillankorva,S., Shneider,M. and Azeredo,J. 2021-06 — GenBank