Protein

View in Explore
Genbank accession
WBM84725.1 [GenBank]
Protein name
putative lytic tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MAQEITWRNIGATVSPGSASSMSAGTTGVQQALGALGDIISRQQEMNVNNARLQREANTQSYLDQVAASTLEQLSNADYRSGLEAQRDAMGMNLDRAATRDAITKQIAAQQNQAAATQKFDDMQAEVGQRGVVDQLRTLAAEGRTGEVNQILAEQQLINEGEIRKELTGVQDAIQNRQYRAAGEQRAQAAANRAAEAHSLSMAAGRENLAFTREQRDELRRDRDESKVVSGTIAMEFQSTDESRQAQNELMRIVGKEAGIPLDDQGMPDLSRASQDQLDAYQEAMQASGVEANTSATHRRNRILKQLTDAGVSSKGIAQAKQEMELRESLEGMAPQDRTKVEATIGAVNSELDTLQRTATEDYEREVARNPFVEPEKDPVGATNKIIDKAVKSGFGWEGDRQDLSNMILDFATNGIKLPDGRTAVVPTKLIEQAFNTTNTWAFKNAGDVEKRIIELMTTDGMTQMREDAPTIRENFLKTVSDIANQKRSNAVKVTRSAEREKGVTMDPTDDLTFALRGRKR
Physico‐chemical
properties
protein length:521 AA
molecular weight: 57253,93160 Da
isoelectric point:5,08143
aromaticity:0,03455
hydropathy:-0,70749

Domains

Domains [InterPro]
DC_0193
STR
1–521
DC_0193
Coil
Unmapped
202–222
Coil
WBM84725.1
1 521
Architecture
STR
STR 1-521
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeP_PS28
[NCBI] 		3018996 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBM84725.1 [NCBI]
Genbank nucleotide accession
OQ134474 [NCBI]
CDS location
range 70129 -> 71694
strand +
CDS
ATGGCCCAAGAAATCACTTGGCGTAACATTGGTGCAACGGTAAGTCCCGGCAGCGCATCGTCGATGTCTGCTGGGACTACTGGTGTCCAACAAGCACTCGGTGCATTGGGTGACATCATCTCCCGTCAGCAGGAGATGAACGTCAACAATGCCCGGTTGCAGCGTGAAGCCAACACGCAAAGCTACCTGGACCAGGTTGCTGCATCGACCCTGGAACAACTCAGCAACGCAGACTATCGCAGTGGTCTGGAAGCCCAGCGTGATGCAATGGGCATGAACCTGGACCGTGCTGCTACACGTGATGCCATCACGAAGCAGATCGCAGCCCAGCAGAACCAAGCCGCCGCTACTCAGAAGTTCGACGACATGCAGGCAGAAGTAGGTCAGCGTGGTGTTGTAGACCAGCTGCGTACTCTGGCTGCTGAAGGTCGGACTGGTGAAGTCAACCAGATCTTGGCCGAGCAACAGCTGATCAACGAGGGCGAGATCCGCAAGGAACTCACCGGTGTGCAGGATGCTATCCAGAATCGGCAGTACCGGGCAGCTGGTGAACAGCGTGCACAGGCAGCGGCCAACCGGGCGGCTGAAGCACACTCCCTCTCCATGGCTGCTGGTCGGGAGAATCTGGCTTTCACTCGTGAGCAGCGTGATGAATTACGCCGTGATCGGGATGAGTCGAAGGTGGTTTCGGGAACCATCGCTATGGAGTTCCAGAGCACAGATGAATCCCGACAGGCTCAGAACGAACTGATGCGCATTGTAGGCAAAGAGGCCGGCATCCCTCTGGATGACCAGGGAATGCCTGACTTGAGCCGTGCTTCTCAAGACCAGCTGGACGCCTATCAGGAAGCTATGCAGGCTTCTGGGGTGGAAGCGAATACTTCCGCTACCCACCGCAGGAACAGGATCCTCAAGCAGCTTACTGATGCTGGCGTAAGTTCGAAGGGTATCGCTCAAGCCAAGCAAGAGATGGAACTCCGGGAATCCCTGGAGGGGATGGCTCCGCAAGATCGCACGAAGGTTGAAGCAACCATCGGTGCGGTTAACTCCGAACTGGACACCTTGCAGCGCACGGCTACCGAGGACTACGAACGGGAAGTTGCACGTAACCCGTTTGTTGAACCGGAGAAGGATCCTGTTGGTGCGACCAACAAGATCATCGACAAGGCCGTGAAGTCTGGCTTCGGATGGGAAGGTGACCGCCAGGATCTGAGCAACATGATCTTGGACTTCGCCACCAACGGAATCAAGCTACCCGACGGACGTACTGCTGTAGTTCCCACTAAGCTGATAGAGCAGGCGTTCAATACCACGAACACTTGGGCATTCAAGAATGCTGGTGACGTGGAGAAACGGATCATCGAACTCATGACCACTGATGGCATGACTCAGATGCGAGAAGACGCTCCGACCATTCGGGAAAACTTCCTGAAAACTGTGTCGGATATCGCCAACCAAAAACGGTCGAATGCCGTTAAGGTAACTCGCTCGGCAGAACGGGAAAAGGGTGTTACCATGGACCCAACCGATGATCTAACTTTTGCACTACGAGGGAGGAAACGATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
2536d6fbf7d761d1001e667f7925639548737cccf1b6e6dce268c6b13b47cfe6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7247
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of bacteriophages infecting Pseudomonas aeruginosa Atef,A., El-Ganiny,A., Shaker,G. and Askoura,M. 2021-04-27 — GenBank