Protein

View in Explore
Genbank accession
QPX47976.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSDIRVNRWLHQSGTGGVYQDSSGRVGIGTSVPTSALDIQSGSIKIGSNTLSSSGVSTFTNIVVSSGSTAVPSISPTGDSNTGIFFPAADTVAIGEGGVEVLRVDSSSNIGINSTSPARKLDVVDSGASGSVIRSRVTTNNGGYLAYEALNSSGTSVFSVTHNGRINLSENIVFASGQGLDFSATSDGSGTMSSELLADYEEGIWTPRISGTGGGDYTPGANNLGRYVKVGKIVTASATIHWTAAVTPYIGNFIVSGLPYAALSVSNYRAAGSIPGQVVGVYASGSYNMLKAGIDGSNSFVYIVMASETITSSSNYSHTPTVLSSGTLYGFTITYVSN
Physico‐chemical
properties
protein length:338 AA
molecular weight: 34539,63100 Da
isoelectric point:5,29764
aromaticity:0,07988
hydropathy:0,05917

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPX47976.1
1 338
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,5969
Central domain 11 206 197 0,1316
C-terminal 207 338 131 0,9992
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-206
C-terminal
207-338

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-SRM01
[NCBI] 		2781608 Uroviricota > Caudoviricetes > Pantevenvirales > Serangoonvirus > Serangoonvirus essarone
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPX47976.1 [NCBI]
Genbank nucleotide accession
MW015081.1 [NCBI]
CDS location
range 9568 -> 10584
strand +
CDS
ATGTCTGACATAAGGGTTAATCGTTGGTTACATCAATCTGGTACTGGCGGAGTCTATCAAGATTCCAGTGGTAGAGTCGGTATCGGAACGTCTGTACCAACGAGTGCTTTAGATATTCAGTCAGGGTCAATTAAGATTGGTAGCAATACTTTAAGTTCTTCTGGGGTTTCTACTTTTACAAATATTGTAGTTTCTTCGGGATCAACAGCAGTACCATCCATAAGTCCGACAGGGGATTCTAATACTGGAATATTCTTTCCTGCTGCTGATACTGTTGCAATTGGTGAGGGTGGTGTAGAGGTACTAAGAGTTGATAGTAGTTCTAATATTGGTATAAACAGCACTTCACCAGCAAGAAAACTTGACGTTGTAGATAGTGGTGCTAGTGGTTCTGTTATAAGGTCTAGAGTCACAACTAATAATGGTGGATATCTAGCATATGAGGCACTGAACTCTTCTGGAACTTCTGTATTCAGTGTAACTCATAATGGAAGAATAAACCTTTCAGAAAATATTGTTTTTGCCTCTGGACAGGGATTAGACTTCTCTGCAACCTCTGATGGTTCTGGAACAATGTCTAGTGAGTTGTTAGCAGATTATGAGGAAGGAATTTGGACACCAAGAATTTCAGGGACTGGTGGTGGAGATTATACTCCAGGAGCAAATAATCTAGGTCGATATGTTAAAGTAGGAAAAATAGTAACTGCATCTGCAACAATTCATTGGACTGCTGCAGTTACTCCATATATTGGAAATTTTATTGTTTCAGGTCTTCCATATGCTGCATTAAGTGTTAGTAACTATAGAGCAGCGGGTTCTATTCCAGGACAAGTAGTTGGAGTGTATGCATCTGGGTCTTACAATATGTTAAAAGCAGGAATAGATGGCAGCAATTCTTTTGTCTATATTGTTATGGCATCCGAAACAATTACTTCAAGTAGCAATTATTCTCATACTCCAACTGTTCTTTCTTCAGGAACCTTGTATGGATTTACAATCACATATGTATCAAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
110455f5743a754c9a559760502975ceeb90d99565bd23d1aef7ff3dfa11a644
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7273
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50