Protein
View in Explore- Genbank accession
- AIT14126.1 [GenBank]
- Protein name
- putative DNA condensation protein
- RBP type
-
TSP
- Protein sequence
-
MLPFTRMVKYGNIAPEAPKIKKVLCGLDNLYVLYGDGSLYGCGVNTYLQLNVENTATRNTWILISEGVTDAWAGAYNILYLKGEEFIMHGVTTQLGTGNTMIPLGGLNVTSSFPHISNIKMISIGADTMHYVDASGSIVYGRGMNGNYSLGGGYSTAQSTFVSVVNTGANTVLDILGTQNNTLILTSNNELLGCGSSGYGSLGVSPGQYTTLVSRLTSVKLFGGNSTGTLAYSASNIYNAGWQYIGQLGNGITTNTQVYPFTFNSTPIDSKIHKISKSSSTSYVNMYATTEGKIYSTGEFGRNGSGGGLSRFTNTLTLDNYNPEKSSLYTCAHFSIVFDGNNQIYACGSFLYVPGPITTNSWSAITMPK
- Physico‐chemical
properties -
protein length: 369 AA molecular weight: 39372,83040 Da isoelectric point: 7,59184 aromaticity: 0,10840 hydropathy: -0,04146
Domains
Domains [InterPro]
DC_0433
ATT
1–115
ATT
1–115
IPR009091
STR
6–327
STR
6–327
IPR009091
STR
16–262
STR
16–262
IPR051553
Unmapped
18–315
Unmapped
18–315
DC_0436
RBD
90–222
RBD
90–222
1
369
Architecture
ATT 1-115 | STR 116-327 | RBD 328-369
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
369
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 68 | 68 | 0,0946 |
| Central domain | 69 | 269 | 202 | 0,2937 |
| C-terminal | 270 | 369 | 99 | 0,7877 |
Note: Constraints were applied during segmentation.
Fixed 84 C-terminal predictions appearing before Central domain
Fixed 84 C-terminal predictions appearing before Central domain
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-68
1-68
Central
69-269
69-269
C-terminal
270-369
270-369
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Escherichia phage 121Q [NCBI] |
1555202 | Uroviricota > Caudoviricetes > Asteriusvirus > |
| Host |
Escherichia coli [NCBI] |
562 | cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
AIT14126.1
[NCBI]
Genbank nucleotide accession
KM507819
[NCBI]
CDS location
range 118322 -> 119431
strand -
strand -
CDS
ATGTTACCTTTCACAAGAATGGTTAAGTACGGAAATATTGCACCTGAAGCACCAAAGATAAAGAAAGTACTGTGCGGTCTTGATAATTTGTACGTCCTCTATGGCGATGGTTCACTTTATGGTTGTGGGGTTAATACGTATTTGCAGTTAAACGTTGAAAATACAGCAACAAGAAATACTTGGATATTAATTTCAGAAGGTGTTACTGATGCATGGGCTGGTGCGTACAATATTCTTTATCTCAAGGGTGAAGAATTCATAATGCATGGAGTTACCACACAATTAGGCACAGGAAATACTATGATTCCGTTGGGTGGTTTAAATGTTACTTCTTCATTTCCACATATATCTAATATTAAAATGATATCAATTGGTGCAGATACAATGCACTACGTTGATGCTAGTGGTTCGATTGTTTATGGTAGAGGCATGAATGGTAACTATTCACTCGGTGGTGGGTATTCCACTGCTCAGAGTACTTTTGTTTCAGTTGTTAATACCGGAGCTAATACAGTCCTTGATATATTGGGTACACAGAATAACACATTAATATTAACATCAAATAATGAACTTCTCGGTTGCGGGAGCAGTGGGTATGGTTCACTTGGCGTAAGTCCCGGACAGTATACTACACTAGTAAGCAGGTTAACAAGTGTTAAACTATTTGGTGGTAACAGTACTGGTACTCTTGCTTATTCAGCCAGCAATATATACAACGCAGGTTGGCAATATATTGGTCAACTTGGTAACGGTATTACAACGAACACACAAGTATATCCATTTACATTTAACTCCACTCCTATTGATAGTAAGATACATAAAATATCAAAATCAAGTTCGACTTCATATGTTAATATGTACGCAACAACCGAAGGAAAGATATACAGTACTGGTGAATTTGGTAGAAATGGTTCGGGAGGTGGTTTGAGTAGATTCACCAATACACTAACTTTAGATAATTACAACCCAGAAAAATCATCATTATACACATGTGCACATTTTAGTATAGTATTTGATGGTAATAATCAAATTTATGCTTGTGGTTCTTTTTTGTATGTACCAGGTCCTATCACCACGAACTCATGGTCTGCAATTACAATGCCGAAATAA
Genome Context
Genome Context
Tertiary structure
PDB ID
d0a9af646a604c5f74a0fec8d1a3b37344f4ce9a347c2c322dc9f7b87ce6d6c3
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50