Protein

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Genbank accession
QGZ00819.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAFSWQESVKPAGTQDIQCDIEYLDKSYIHVYLDGAETTAFTWTSSTNIRLSSPLSAETAVLLIRKTEREYLYIEFASGAPFIEGNVDTQNMQLLHLAQELVEGRYIEGFYGDINMHRYRITYVGDPVDALDAANKQYVDGGDARLDQRIDAEHAAWMAGDAALDSRVVNLEQNYFGANTNSFPWWTILTSDTDTVTPGMPFTKAKVRVNGLTKTAGYSYTVNSGVVKFTEVLPAGTLVDMTIGIDTEADTSAVSSILELLTAPSGASLISSGNAPVSVLLRRSIFEFMSAGDRTLITGTVGTEVLVDYAIAAAVAAGVTELYFPPVPGIYVVGQTPVTLPAGFSITGVAAKPYTASSNASFNSRGTVIRLASGATAPFILTNRHRFLNVILDGRNSSVNLMKGVGSDQTQYCRFDSCGIYRWLNGIGGSSSSGYTATVQVIGCALASNYRGVRNVIDSRFTDCTINANTYNGVELNAGANNNSFLNVRNEWNGAHNYFASGAKRNVVCGELCDRAGLSGFVAVNGGQWVVCGVTVQRSGKNAVVGSVDDAHFQLAGGSSSIIINGVDTLAGANDDGSGTSTPSCTLSTSGANSDEKTFIATGSRLGGFTGTSWLRSGVVKNLSVLGCAGIPDVKNFGFSQSEDGATRLGDKVSSLALSGAGSTATLTFAVSSDGARSRYSEPLVRKLEITARNNTSTGSVSRFYADLIISRESATAAVAVDASSVKTHSTLSGGTWGLASASPTGVSVTPTISADGSTLTVTLTAVDNAPRLIWAQLRG
Physico‐chemical
properties
protein length:780 AA
molecular weight: 82080,61820 Da
isoelectric point:5,24547
aromaticity:0,08205
hydropathy:0,00628

Domains

Domains [InterPro]
DC_1609
STR
1–511
DC_1609 DC_0257
IPR005604
ATT
13–102
IPR005604 IPR012334
QGZ00819.1
1 780
Architecture
STR
ATT
STR
RBD
STR 1-12 | ATT 13-102 | STR 103-604 | RBD 605-780
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QGZ00819.1
1 780
Domain Start End Length (AA) Confidence
N-terminal 1 301 301 0,9961
Central domain 302 642 342 0,9875
C-terminal 643 780 137 0,9662
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-301
Central
302-642
C-terminal
643-780

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage VLC2
[NCBI] 		2686205 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ00819.1 [NCBI]
Genbank nucleotide accession
MN794001.1 [NCBI]
CDS location
range 37210 -> 39552
strand +
CDS
ATGGCATTCAGCTGGCAAGAGTCGGTAAAGCCTGCAGGTACTCAGGATATCCAGTGCGATATCGAGTACCTGGATAAGTCCTATATTCACGTTTACTTAGATGGTGCTGAGACTACTGCCTTCACTTGGACCAGCTCCACAAATATTCGTCTGAGCTCCCCGCTGTCTGCAGAGACAGCGGTGCTACTCATTCGTAAGACTGAACGAGAGTACCTCTACATTGAGTTTGCTAGCGGCGCTCCGTTCATAGAGGGTAACGTAGACACCCAGAATATGCAGCTCCTGCATCTGGCGCAGGAGCTGGTCGAGGGGCGTTATATCGAAGGCTTCTACGGTGACATTAACATGCACCGCTACCGCATCACCTATGTAGGAGACCCTGTGGACGCACTCGACGCTGCAAACAAGCAGTACGTCGACGGCGGGGATGCCCGTTTAGACCAGCGCATTGACGCAGAACACGCCGCATGGATGGCGGGAGACGCTGCGCTGGACTCTCGTGTTGTGAACTTAGAGCAGAACTACTTTGGAGCTAACACTAACAGTTTCCCATGGTGGACTATACTGACGTCTGATACGGACACAGTAACGCCGGGCATGCCTTTTACCAAGGCCAAGGTTCGAGTGAACGGCCTTACTAAGACTGCGGGATACTCCTACACTGTTAACTCTGGTGTAGTAAAGTTCACCGAGGTCTTACCGGCAGGTACGTTGGTTGATATGACTATCGGTATCGACACAGAGGCCGACACTAGCGCTGTATCCTCCATCTTGGAACTGCTAACGGCTCCTTCCGGTGCCTCCCTAATTAGCAGCGGGAACGCGCCTGTGTCGGTTCTGCTACGCCGCAGCATCTTCGAATTTATGTCTGCTGGGGATAGGACGCTAATAACCGGTACGGTCGGCACTGAGGTGCTGGTGGATTACGCCATTGCCGCGGCAGTTGCTGCCGGGGTAACTGAGCTGTACTTCCCACCTGTACCTGGTATCTACGTAGTGGGGCAAACCCCTGTCACGCTACCGGCTGGATTTTCTATTACCGGGGTGGCGGCTAAGCCCTACACAGCGTCTTCTAATGCTTCTTTTAACTCTAGAGGCACGGTGATTAGGCTGGCTTCTGGGGCCACAGCTCCGTTCATCCTGACAAACAGGCACCGATTTCTCAACGTAATACTGGACGGTAGGAACTCTTCCGTAAACTTGATGAAGGGGGTAGGCTCAGACCAAACTCAGTATTGCCGATTCGACTCTTGTGGGATTTACCGCTGGCTTAACGGTATCGGCGGCTCCAGTTCCTCTGGGTACACGGCAACTGTACAGGTAATTGGGTGTGCTCTTGCCAGCAACTATAGGGGTGTTCGTAACGTAATTGACTCCAGGTTCACGGACTGTACCATTAATGCCAACACATATAATGGGGTTGAGCTTAATGCCGGGGCCAATAACAACAGCTTCCTGAACGTTAGGAACGAGTGGAACGGCGCGCACAACTACTTCGCCTCCGGGGCTAAGCGTAACGTGGTTTGTGGTGAGCTATGTGACCGTGCAGGCCTAAGTGGCTTTGTTGCAGTGAACGGAGGTCAGTGGGTAGTTTGTGGCGTAACAGTTCAGCGCTCCGGGAAGAACGCAGTGGTTGGCAGTGTAGATGATGCGCACTTCCAGTTAGCTGGAGGGTCTTCCTCTATTATCATCAACGGCGTAGACACCCTAGCGGGTGCCAATGATGATGGTAGCGGTACATCTACGCCGTCTTGCACGCTGTCGACGTCTGGGGCGAATTCGGATGAAAAGACCTTCATAGCCACTGGGTCTAGGTTGGGAGGGTTCACCGGAACATCCTGGCTACGTTCTGGGGTTGTGAAGAACCTGTCGGTGCTGGGGTGTGCCGGTATTCCGGACGTTAAGAACTTTGGATTTAGTCAAAGCGAAGATGGTGCTACTCGATTGGGTGACAAAGTGTCTTCCCTCGCTCTGTCGGGTGCAGGAAGCACTGCAACTCTAACTTTCGCAGTAAGTTCTGACGGGGCACGTTCGCGGTACAGTGAACCCCTAGTCAGGAAGTTAGAGATAACTGCCCGAAACAATACCAGCACCGGGTCCGTGTCTAGATTCTATGCAGACTTAATTATCTCCAGAGAATCTGCGACAGCCGCTGTGGCGGTGGACGCGTCCTCAGTTAAAACCCACTCCACGCTTAGCGGGGGTACTTGGGGCCTTGCAAGCGCCAGCCCGACTGGGGTGTCTGTAACCCCTACAATCTCAGCTGACGGCTCTACTTTAACCGTGACGCTAACCGCTGTGGATAACGCGCCAAGACTTATATGGGCACAATTGAGAGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3afe5a25bd80f170836c6c9e52fee414e080e60feb610fd86752c147a7a5d854
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7773
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of novel and strongly lytic Klebsiella pneumoniae phages in Valencia (Spain) Domingo-Calap,P., Beamud,B., Vienne,J., Gonzalez-Candelas,F. and Sanjuan,R. 2020-01-09 — GenBank