Protein

View in Explore
Genbank accession
QGZ00819.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MAFSWQESVKPAGTQDIQCDIEYLDKSYIHVYLDGAETTAFTWTSSTNIRLSSPLSAETAVLLIRKTEREYLYIEFASGAPFIEGNVDTQNMQLLHLAQELVEGRYIEGFYGDINMHRYRITYVGDPVDALDAANKQYVDGGDARLDQRIDAEHAAWMAGDAALDSRVVNLEQNYFGANTNSFPWWTILTSDTDTVTPGMPFTKAKVRVNGLTKTAGYSYTVNSGVVKFTEVLPAGTLVDMTIGIDTEADTSAVSSILELLTAPSGASLISSGNAPVSVLLRRSIFEFMSAGDRTLITGTVGTEVLVDYAIAAAVAAGVTELYFPPVPGIYVVGQTPVTLPAGFSITGVAAKPYTASSNASFNSRGTVIRLASGATAPFILTNRHRFLNVILDGRNSSVNLMKGVGSDQTQYCRFDSCGIYRWLNGIGGSSSSGYTATVQVIGCALASNYRGVRNVIDSRFTDCTINANTYNGVELNAGANNNSFLNVRNEWNGAHNYFASGAKRNVVCGELCDRAGLSGFVAVNGGQWVVCGVTVQRSGKNAVVGSVDDAHFQLAGGSSSIIINGVDTLAGANDDGSGTSTPSCTLSTSGANSDEKTFIATGSRLGGFTGTSWLRSGVVKNLSVLGCAGIPDVKNFGFSQSEDGATRLGDKVSSLALSGAGSTATLTFAVSSDGARSRYSEPLVRKLEITARNNTSTGSVSRFYADLIISRESATAAVAVDASSVKTHSTLSGGTWGLASASPTGVSVTPTISADGSTLTVTLTAVDNAPRLIWAQLRG
Physico‐chemical
properties
protein length:780 AA
molecular weight: 82080,61820 Da
isoelectric point:5,24547
aromaticity:0,08205
hydropathy:0,00628

Domains

Domains [InterPro]
IPR005604
13–102
IPR005604 IPR012334
QGZ00819.1
1 780
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage VLC2
[NCBI] 		2686205 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ00819.1 [NCBI]
Genbank nucleotide accession
MN794001.1 [NCBI]
CDS location
range 37210 -> 39552
strand +
CDS
ATGGCATTCAGCTGGCAAGAGTCGGTAAAGCCTGCAGGTACTCAGGATATCCAGTGCGATATCGAGTACCTGGATAAGTCCTATATTCACGTTTACTTAGATGGTGCTGAGACTACTGCCTTCACTTGGACCAGCTCCACAAATATTCGTCTGAGCTCCCCGCTGTCTGCAGAGACAGCGGTGCTACTCATTCGTAAGACTGAACGAGAGTACCTCTACATTGAGTTTGCTAGCGGCGCTCCGTTCATAGAGGGTAACGTAGACACCCAGAATATGCAGCTCCTGCATCTGGCGCAGGAGCTGGTCGAGGGGCGTTATATCGAAGGCTTCTACGGTGACATTAACATGCACCGCTACCGCATCACCTATGTAGGAGACCCTGTGGACGCACTCGACGCTGCAAACAAGCAGTACGTCGACGGCGGGGATGCCCGTTTAGACCAGCGCATTGACGCAGAACACGCCGCATGGATGGCGGGAGACGCTGCGCTGGACTCTCGTGTTGTGAACTTAGAGCAGAACTACTTTGGAGCTAACACTAACAGTTTCCCATGGTGGACTATACTGACGTCTGATACGGACACAGTAACGCCGGGCATGCCTTTTACCAAGGCCAAGGTTCGAGTGAACGGCCTTACTAAGACTGCGGGATACTCCTACACTGTTAACTCTGGTGTAGTAAAGTTCACCGAGGTCTTACCGGCAGGTACGTTGGTTGATATGACTATCGGTATCGACACAGAGGCCGACACTAGCGCTGTATCCTCCATCTTGGAACTGCTAACGGCTCCTTCCGGTGCCTCCCTAATTAGCAGCGGGAACGCGCCTGTGTCGGTTCTGCTACGCCGCAGCATCTTCGAATTTATGTCTGCTGGGGATAGGACGCTAATAACCGGTACGGTCGGCACTGAGGTGCTGGTGGATTACGCCATTGCCGCGGCAGTTGCTGCCGGGGTAACTGAGCTGTACTTCCCACCTGTACCTGGTATCTACGTAGTGGGGCAAACCCCTGTCACGCTACCGGCTGGATTTTCTATTACCGGGGTGGCGGCTAAGCCCTACACAGCGTCTTCTAATGCTTCTTTTAACTCTAGAGGCACGGTGATTAGGCTGGCTTCTGGGGCCACAGCTCCGTTCATCCTGACAAACAGGCACCGATTTCTCAACGTAATACTGGACGGTAGGAACTCTTCCGTAAACTTGATGAAGGGGGTAGGCTCAGACCAAACTCAGTATTGCCGATTCGACTCTTGTGGGATTTACCGCTGGCTTAACGGTATCGGCGGCTCCAGTTCCTCTGGGTACACGGCAACTGTACAGGTAATTGGGTGTGCTCTTGCCAGCAACTATAGGGGTGTTCGTAACGTAATTGACTCCAGGTTCACGGACTGTACCATTAATGCCAACACATATAATGGGGTTGAGCTTAATGCCGGGGCCAATAACAACAGCTTCCTGAACGTTAGGAACGAGTGGAACGGCGCGCACAACTACTTCGCCTCCGGGGCTAAGCGTAACGTGGTTTGTGGTGAGCTATGTGACCGTGCAGGCCTAAGTGGCTTTGTTGCAGTGAACGGAGGTCAGTGGGTAGTTTGTGGCGTAACAGTTCAGCGCTCCGGGAAGAACGCAGTGGTTGGCAGTGTAGATGATGCGCACTTCCAGTTAGCTGGAGGGTCTTCCTCTATTATCATCAACGGCGTAGACACCCTAGCGGGTGCCAATGATGATGGTAGCGGTACATCTACGCCGTCTTGCACGCTGTCGACGTCTGGGGCGAATTCGGATGAAAAGACCTTCATAGCCACTGGGTCTAGGTTGGGAGGGTTCACCGGAACATCCTGGCTACGTTCTGGGGTTGTGAAGAACCTGTCGGTGCTGGGGTGTGCCGGTATTCCGGACGTTAAGAACTTTGGATTTAGTCAAAGCGAAGATGGTGCTACTCGATTGGGTGACAAAGTGTCTTCCCTCGCTCTGTCGGGTGCAGGAAGCACTGCAACTCTAACTTTCGCAGTAAGTTCTGACGGGGCACGTTCGCGGTACAGTGAACCCCTAGTCAGGAAGTTAGAGATAACTGCCCGAAACAATACCAGCACCGGGTCCGTGTCTAGATTCTATGCAGACTTAATTATCTCCAGAGAATCTGCGACAGCCGCTGTGGCGGTGGACGCGTCCTCAGTTAAAACCCACTCCACGCTTAGCGGGGGTACTTGGGGCCTTGCAAGCGCCAGCCCGACTGGGGTGTCTGTAACCCCTACAATCTCAGCTGACGGCTCTACTTTAACCGTGACGCTAACCGCTGTGGATAACGCGCCAAGACTTATATGGGCACAATTGAGAGGTTAA

Tertiary structure

PDB ID
3afe5a25bd80f170836c6c9e52fee414e080e60feb610fd86752c147a7a5d854
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7773
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of novel and strongly lytic Klebsiella pneumoniae phages in Valencia (Spain) Domingo-Calap,P., Beamud,B., Vienne,J., Gonzalez-Candelas,F. and Sanjuan,R. 2020-01-09 — GenBank