Protein

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Genbank accession
QPD06464.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAVTQNLYTGDGLTVLFSFTFPYLETSDIKVSVDGTNTTAYTLANATTIQFNTAPANGAAIRIYRQTDDSELSATFYPGSAIRSQDLNDNFTQNLYVTQEVNNNAVKTDGSNTLVGDLDMGGFEVINVGTPTSDGAAVNKQYVDSRLGDLDIPGFTRWTYNATGGETDLSGAGSSGGTLAYSAGREQVFLNGAQQQRGVDYTADDGINIEFAIALTAGDLVEVICVNNLNTGTTAQAQDVSFVQAGSGAITRSVQNKLRDVVSVKDFGAVGDGVTDDTAAIQAALNYVNSVGGGVVYLPPGRYRKADTSPTLVMYSNTTIRGEGDCSVIAHDDLPTNPRRDLLQADNTSNIAFENFKIEGTLQTHTVETNQSQSLTGIGINGLRMNGVTIQSVRYMATAFSYVRGGVVKDCRFIDVLRDGARFTHSQDISIIGNVFRRVADDAVALHSLDTDSTIPLPTGVVNWGAVPTQSGLIVSGNTFEASQGVKILGAKIASVSNNTMRRMLRLPITIDSSIDLPEGNTPIFCINVVDNVITDTLLNFNAPTLSGGYVIKVKIRHRSKGALSSQPGYLTDVAPYNWTNNTDAAGAVNVGAWGLTIARNTIATTLPVTGVAKYSDYGYGTILDRQGGSFGPGFYDPAITSTFFSTGGIYCEGPVRGLVIESNMLSGGGIDTRAIDIQGYTATNGTDRDALVIRNNTITDWPGTGIALGSDNNSTNCMIVGNWLDLDPLFRHPDHSAVNNTWGSTTSVSGIITAAGSYGVVDGNMFLHVARVTSNIAGFSWGTNTVIFDPNGTIGLDGPANCLGVRTVPGSLRFIHIIYDGNPASPTFKKVTFTPRIYSNAMPTTGTYVYGHIVNNPSPLTVNPGAGQEYSVIGWQRITTGSSHVLNTDWKQLRCLTGQ
Physico‐chemical
properties
protein length:900 AA
molecular weight: 95554,22590 Da
isoelectric point:4,91273
aromaticity:0,08111
hydropathy:-0,10100

Domains

Domains [InterPro]
DC_0126
ATT
1–183
DC_0126 IPR012334 IPR011050
IPR005604
ATT
7–105
IPR005604 IPR051801 IPR006626 IPR006626 IPR006626 IPR006626 DC_2129
IPR011050
STR
260–603
IPR011050 IPR006626 IPR006626
IPR024535
ENZ
262–438
IPR024535
QPD06464.1
1 900
Architecture
ATT
STR
ATT 1-183 | STR 227-900
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPD06464.1
1 900
Domain Start End Length (AA) Confidence
N-terminal 1 274 274 0,9927
Central domain 275 797 524 0,9895
C-terminal 798 900 102 0,9337
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-274
Central
275-797
C-terminal
798-900

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-SRP01
[NCBI] 		2781607 Uroviricota > Caudoviricetes > Autographivirales > Nerivirus > Nerivirus SSRP01
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPD06464.1 [NCBI]
Genbank nucleotide accession
MW015080.1 [NCBI]
CDS location
range 39418 -> 42120
strand +
CDS
ATGGCTGTCACTCAAAACTTATACACAGGGGACGGCTTGACCGTCCTTTTTTCTTTTACATTTCCATATCTTGAGACCAGCGACATCAAAGTAAGTGTTGATGGTACAAATACAACTGCATACACCCTTGCCAACGCTACAACTATCCAGTTCAATACAGCTCCTGCCAATGGTGCTGCTATCCGAATCTATCGTCAGACAGACGATAGCGAACTTTCGGCTACCTTCTATCCAGGCTCTGCTATCCGTTCGCAGGATCTAAACGACAACTTCACTCAAAACCTATACGTTACCCAAGAGGTAAATAACAACGCTGTTAAGACAGATGGTTCTAACACGTTGGTTGGTGATCTTGATATGGGTGGCTTTGAAGTCATCAATGTCGGAACCCCTACCTCTGATGGTGCCGCTGTTAATAAGCAGTATGTCGATAGCCGTCTGGGTGACCTTGATATTCCTGGGTTTACCCGTTGGACTTATAACGCAACTGGTGGTGAGACTGACCTTTCAGGAGCTGGCTCTAGTGGTGGAACCCTTGCTTACAGTGCTGGCCGTGAACAGGTCTTCCTGAATGGTGCTCAACAGCAACGTGGTGTTGATTACACCGCTGATGATGGGATTAACATTGAGTTTGCCATTGCACTGACTGCTGGTGATCTTGTAGAAGTCATCTGCGTCAATAACCTCAATACTGGTACGACAGCACAAGCTCAGGATGTCTCCTTTGTTCAGGCTGGTTCAGGTGCTATTACCCGTAGCGTACAGAATAAGTTGCGTGATGTCGTCTCCGTCAAAGACTTCGGTGCAGTCGGTGACGGGGTGACGGATGATACGGCTGCGATTCAGGCGGCCTTGAATTACGTTAATAGCGTTGGTGGTGGTGTTGTGTACTTGCCTCCTGGGCGTTATCGCAAGGCTGACACAAGTCCCACGCTGGTCATGTACTCAAACACTACGATAAGAGGCGAGGGAGATTGTTCAGTCATCGCCCACGATGATCTGCCAACAAACCCAAGGCGTGACCTGCTTCAGGCAGATAACACATCAAACATCGCTTTTGAGAACTTTAAGATCGAAGGCACACTGCAAACGCACACAGTTGAAACTAACCAAAGCCAATCGCTAACAGGAATTGGGATCAACGGACTAAGAATGAATGGCGTAACCATTCAGTCAGTGCGATATATGGCGACGGCATTCTCGTATGTTCGTGGCGGCGTAGTTAAAGACTGTCGGTTTATTGATGTTCTTCGAGATGGCGCACGATTTACTCATTCGCAAGACATTTCCATTATTGGAAACGTTTTCCGCCGGGTGGCTGACGACGCCGTAGCCCTCCACTCTTTAGACACTGATTCCACTATTCCTCTTCCGACTGGGGTAGTAAACTGGGGCGCTGTTCCAACTCAAAGCGGCCTTATTGTTTCTGGAAATACCTTCGAGGCTTCTCAAGGAGTCAAGATCCTTGGAGCAAAAATCGCGTCTGTATCCAACAATACGATGCGTAGGATGCTGAGGCTGCCTATTACGATAGACAGCTCTATTGACTTGCCAGAGGGTAACACGCCTATCTTCTGTATCAATGTTGTTGACAATGTAATTACAGATACTCTCCTTAACTTCAACGCTCCTACACTTTCTGGCGGCTACGTCATCAAAGTTAAGATCAGACACAGGAGTAAGGGTGCTTTGTCCTCCCAGCCTGGTTACTTAACCGATGTTGCTCCATACAACTGGACAAACAACACAGACGCTGCTGGAGCTGTCAATGTCGGAGCATGGGGGCTCACTATCGCCCGAAACACAATCGCCACCACGCTGCCTGTTACAGGTGTCGCAAAATATTCGGACTATGGGTACGGCACTATCTTGGATAGGCAAGGAGGGTCTTTCGGACCGGGCTTCTACGACCCTGCAATTACGAGCACATTCTTCTCCACTGGAGGGATTTATTGCGAGGGACCAGTGCGCGGCCTTGTCATTGAATCCAACATGCTGTCGGGCGGCGGCATTGATACGCGAGCTATTGACATTCAGGGTTACACAGCCACCAACGGAACCGACAGGGATGCGTTGGTTATCAGGAACAACACGATCACAGATTGGCCAGGAACAGGCATTGCTTTAGGCTCAGATAACAACTCAACAAACTGCATGATTGTTGGAAACTGGTTGGATTTGGATCCTTTGTTTCGCCATCCTGATCATTCGGCTGTTAACAACACCTGGGGTTCCACTACTTCTGTCTCCGGTATCATCACAGCTGCTGGTAGCTATGGAGTAGTCGATGGTAATATGTTCCTTCATGTGGCCAGAGTTACAAGCAACATTGCTGGATTCTCTTGGGGTACAAATACCGTCATTTTTGATCCAAACGGCACGATTGGTCTTGATGGTCCAGCAAATTGTCTTGGTGTTAGGACGGTCCCAGGTTCGCTACGCTTTATTCATATTATCTACGACGGCAACCCAGCCAGTCCCACCTTCAAAAAAGTTACCTTTACGCCGCGCATCTACTCAAACGCAATGCCCACAACTGGTACTTACGTCTACGGGCATATAGTCAACAATCCGTCGCCTTTAACGGTTAATCCGGGGGCAGGACAGGAGTATTCAGTTATCGGGTGGCAGCGCATTACCACCGGCTCCAGTCATGTACTTAATACAGATTGGAAGCAGCTCCGATGCTTGACTGGGCAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
13803cf7f47eb9f51195157dc7fd274bd784c6d070c69d8e759d0b00ce544acd
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2823
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50