Protein

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Genbank accession
YP_004323870.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MARQGILAKAKPSAGTNTLLYSAPIDSSASTVLNVTAQGGSNTTFDVALKNYDQKLVVGASNHLLHEGDVITGYRFALSTAIPATAGLAAGTLLTSSDAESTARFESFYLPAFTEIDVRVRSIRAITLESVTGDFAVGETIVKGSGGNTATATIYAVAQGSGSTIVYVGPSTLAGSGSEFADGDALTASGGGTGTISSGGIATAADEFTFQPSGGTENLYLGTDLTLFTDRTYRFDVSDSTMSGRDFKLSTTVNGEYGPDNDFTDTSDNGEEYVTGKTTNGTAGSSGAYVQFDFSQDTSLNSNLYFYDGGTGTASNADFGGSDRYLATSNNYEYDEIYVYDVDGTWTNNVDGFEFNGTTYTVSSQTSGPYGYVRSYSGTDLYVIKGVGSADFAGSDTFQDNPKEGGGTRGTVTVSSVAVAVTAFETQEVIRKDNAITANTTEEIKSLVVGPGERLIVENAAADCSFVLIGFEDASTGFTTRTYSATVVAGAASGGG
Physico‐chemical
properties
protein length:496 AA
molecular weight: 51284,86090 Da
isoelectric point:4,18064
aromaticity:0,10081
hydropathy:-0,16028

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage Syn19
[NCBI] 		445684 Uroviricota > Caudoviricetes > Pantevenvirales > Pontusvirus > Pontusvirus syn19
Host Synechococcus sp. WH 8109
[NCBI] 		166314 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004323870.1 [NCBI]
Genbank nucleotide accession
NC_015286.1 [NCBI]
CDS location
range 25829 -> 27319
strand +
CDS
ATGGCTAGGCAAGGTATTTTAGCAAAAGCAAAACCAAGCGCAGGAACTAATACGTTGCTGTATTCAGCACCTATTGATTCTTCTGCAAGCACGGTGCTTAATGTTACTGCTCAGGGCGGTAGTAACACAACTTTCGATGTTGCCCTAAAAAATTACGATCAAAAATTAGTGGTCGGTGCAAGTAATCACCTGTTGCATGAAGGTGATGTAATCACAGGTTATCGCTTCGCACTGAGCACTGCTATTCCTGCAACAGCAGGTTTGGCAGCAGGAACACTATTAACATCGTCTGACGCTGAATCTACTGCTAGATTTGAATCATTCTATCTTCCAGCATTTACTGAAATTGATGTTCGTGTTAGATCGATTCGTGCAATTACCTTAGAATCTGTAACTGGAGACTTTGCAGTTGGCGAGACTATTGTAAAAGGTAGTGGTGGTAATACGGCAACCGCTACTATCTACGCAGTTGCTCAAGGATCTGGTAGTACAATCGTTTATGTTGGTCCTTCTACCCTTGCAGGGAGTGGATCAGAGTTTGCTGATGGTGATGCACTGACTGCATCTGGTGGTGGAACAGGAACAATTTCTAGTGGTGGTATTGCAACTGCTGCTGATGAGTTTACATTCCAACCATCTGGTGGCACAGAAAATCTTTATCTTGGCACTGATCTTACATTATTCACTGATAGAACGTATCGTTTTGATGTTTCTGACTCCACTATGAGTGGTAGAGATTTCAAACTTTCAACAACAGTTAACGGTGAATATGGTCCTGATAACGATTTTACCGACACTTCTGATAATGGAGAAGAATATGTAACTGGTAAAACAACCAACGGAACTGCTGGTTCTTCTGGTGCATATGTTCAGTTTGATTTTAGTCAAGATACCAGTTTGAACTCTAACTTATATTTTTATGATGGTGGCACTGGTACTGCTTCAAACGCTGATTTTGGTGGTTCGGATCGTTATCTGGCAACATCTAACAACTACGAGTATGATGAAATCTATGTGTATGATGTTGATGGCACATGGACAAATAACGTTGATGGTTTTGAATTCAACGGAACTACTTACACTGTAAGTTCTCAGACTTCTGGTCCATACGGTTATGTTCGTTCATATAGTGGCACCGACCTTTATGTTATTAAAGGTGTAGGTTCTGCTGATTTTGCGGGATCTGATACCTTCCAAGATAACCCCAAAGAAGGTGGTGGAACTCGTGGCACAGTAACTGTCAGCAGTGTTGCTGTTGCTGTTACAGCGTTTGAAACACAGGAAGTAATTCGCAAAGATAATGCAATTACTGCTAATACTACAGAGGAAATCAAATCTTTAGTTGTTGGTCCTGGTGAAAGACTTATTGTTGAAAACGCAGCAGCGGATTGTTCATTCGTATTGATTGGATTTGAAGATGCATCTACAGGATTCACTACTAGAACTTACTCTGCTACGGTTGTTGCTGGCGCAGCGTCTGGTGGCGGTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f27cd066bde209833ca7a79d8c4cacca905487ec54d1f65ce1cbc2aaa5bd3b7b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4760
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage Syn19 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank