Protein

View in Explore
Genbank accession
QDK00661.1 [GenBank]
Protein name
putative tape measure protein
RBP type
TF
Evidence RBPdetect
Probability 0,78
Protein sequence
MTDKLIRELLIDVKQKGATRTAKSIENVSDALENAAAASELTNEQLGKMPKTLYSIERAADRAAKSLTKMQASRGMMGITKSMDSIGAKLDDLAIAMIEVSDKLESGFTHVGKSVKAMGNDVAAATEKVQDRLYDTNRALSGTTRGFNDTTTSAGRASRALGNTSGSARGATRDFAAMAKVGGSLPLMYAAIASNVFVLQSAFEQLKMGDQLNRLEKFGTIVGTQTGTPVQTLARSLQEAAGYAISFEEAMRQASSASAYGFDAEQLNKFGLVARRAAAVLGVDMTDALNRVIKGVSKQEIELLDELGVTIRLNDAYADYVKQLNAANTGITYNINSLSTFQKQQAYANAVIAESTKRFGYLDEVLRATPWEQFAANADAALRKIQQAAAKYLGPVIDSINAVFYTSQASISASAARAQEETNRQIDPTNVGAVALSLSASEEGYNKALDMYKESLDKRNKLKTEFDKRMSQADASTASAIRLVGEGMPVGLAAGGFEVGGVRIGSSEANKKFVEETAAMGLQVARLGKEVDDSTENLNAWKSAYQAAGAAAAKANPEFQKQINLQKDMNDPDAVYDFNSETLKGLTEQQKAYDQAKKTASDLANDIQNIAQNTNTAAKTSASLSDTIKTIESLSAGTGKSADEYVKSLNLGYNTLSEMKTASQALAGYVKLTGDETKNQLAVQQKIAEVYNQTKDKEKAQEAGRHLEVQQLEEQEAALKRVLETNKGNKAIENEIAKIQLEKIKIANQDMEAQKKVKDYTDKILGVDREIALLNNRTMTDTQYRLAQLNLELTIEKEKYAWYSKQVDKQKDAEQSRRAQAQIEREIWKARLDNISRVAAKRQEAFENTLTGMYPLAGEMQKMEMQLEFYKQMKEFTKGNADEQMRWNSEISKTQAQMSALAAQRNAQMQQQVGSSVGATYTPTTGLSGDDKAFADMQNRMASYDQAISKLSELNSEATAVAQSMGNLTNAMIQFSQGSLDTTSLVAAGMQTVSSMIQYSVSQQVSAIDAAIAAEQKRDGKSEASKAKLKKLEAEKVKIQQDAAKKQIIIQTAVAVMQAATAVPYPWSIPLMIAAGVAGALSLAQASSASGMSSIGDSGTETAQYLSLGERQKNVDVSMSANAGELSYIRGDQGIGNANSFVPRAEGGNMYPGVSYQMGEHGTEVITPMVPMKATPTDELKGSSNGTSGRPIVLNISTMDAASFRDFASSNSAAFRDAVEQALNENGTTLKSLGNS
Physico‐chemical
properties
protein length:1236 AA
molecular weight: 133170,15700 Da
isoelectric point:5,75503
aromaticity:0,05502
hydropathy:-0,42241

Domains

Domains [InterPro]
IPR056207
1–81
IPR056207 Coil Coil Coil IPR056208
QDK00661.1
1 1236
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS-26175V
[NCBI] 		2576482 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDK00661.1 [NCBI]
Genbank nucleotide accession
MK907271 [NCBI]
CDS location
range 79307 -> 83017
strand -
CDS
ATGACTGATAAGCTAATACGAGAACTACTTATAGATGTAAAGCAGAAAGGGGCAACCCGTACTGCAAAGTCTATTGAAAACGTATCTGATGCGTTAGAAAACGCTGCTGCTGCTTCCGAACTGACTAATGAGCAGCTAGGAAAAATGCCCAAAACTCTTTATTCCATTGAGAGGGCAGCAGATAGGGCAGCCAAAAGTCTAACAAAAATGCAGGCTAGCAGAGGTATGATGGGCATCACCAAATCTATGGATAGTATTGGTGCTAAGTTAGATGACCTTGCTATTGCTATGATTGAGGTATCTGATAAGCTAGAGTCTGGATTTACACATGTTGGTAAATCTGTTAAGGCGATGGGTAACGATGTAGCTGCTGCAACTGAAAAAGTTCAAGATAGATTATACGATACAAACCGTGCTTTGTCAGGTACTACTAGAGGCTTCAATGATACTACCACATCCGCAGGTCGTGCTAGTCGTGCTCTAGGTAATACCTCTGGTTCTGCACGGGGTGCTACTCGTGACTTCGCAGCAATGGCTAAAGTTGGTGGTTCTCTACCTCTTATGTATGCTGCTATTGCGTCTAACGTGTTCGTTCTACAATCTGCATTCGAACAACTTAAGATGGGCGACCAGTTAAACCGTCTTGAGAAGTTTGGTACTATTGTTGGTACTCAAACAGGTACTCCTGTACAAACTCTAGCTAGATCTCTACAAGAGGCTGCTGGTTATGCAATCTCGTTTGAAGAAGCAATGAGACAGGCATCCTCTGCCTCTGCATATGGATTTGATGCTGAACAACTTAATAAATTTGGTCTAGTAGCTCGTCGTGCTGCTGCTGTTCTTGGTGTTGATATGACTGATGCACTTAACCGTGTAATCAAGGGTGTATCTAAACAAGAAATCGAACTTCTGGACGAACTTGGTGTTACTATTCGTCTTAATGATGCTTACGCTGACTACGTTAAACAGTTAAATGCTGCTAACACAGGTATTACGTATAACATTAATAGTCTTTCCACTTTCCAGAAACAGCAAGCGTATGCTAATGCTGTTATAGCAGAATCTACTAAACGTTTTGGTTACTTAGATGAAGTTTTACGTGCTACTCCGTGGGAGCAGTTTGCTGCTAATGCTGATGCTGCACTAAGAAAGATTCAACAGGCTGCTGCTAAGTATTTAGGGCCGGTAATTGATTCTATCAACGCAGTATTCTATACTTCTCAAGCATCTATCTCAGCTTCTGCTGCTAGAGCACAGGAAGAAACTAACCGTCAGATTGACCCAACTAACGTTGGTGCTGTAGCTTTAAGTCTTTCCGCTTCCGAGGAAGGATATAATAAAGCTCTTGATATGTATAAAGAGTCTCTGGATAAGCGTAATAAACTAAAGACTGAGTTTGATAAACGTATGTCCCAGGCAGATGCTAGTACTGCCTCCGCTATTAGATTAGTAGGTGAGGGAATGCCTGTTGGATTAGCTGCTGGGGGATTTGAAGTAGGGGGAGTGCGCATAGGTTCTTCCGAAGCTAATAAAAAGTTTGTGGAAGAAACCGCAGCTATGGGACTACAGGTAGCAAGGTTAGGTAAAGAAGTTGATGATTCTACTGAAAACCTTAATGCTTGGAAATCTGCGTATCAAGCTGCTGGTGCTGCGGCTGCTAAGGCTAATCCAGAATTTCAGAAGCAGATTAATCTGCAGAAGGATATGAATGACCCTGATGCGGTTTATGACTTTAACTCCGAAACTCTGAAAGGACTGACGGAGCAGCAGAAAGCGTATGATCAAGCTAAGAAAACTGCTAGTGATTTAGCTAACGATATCCAGAACATTGCTCAGAATACTAATACTGCGGCTAAAACTAGCGCATCCTTATCAGATACAATTAAGACTATCGAATCACTATCAGCCGGTACTGGTAAAAGTGCTGATGAGTATGTTAAGAGCCTAAACTTAGGTTACAATACTCTAAGTGAAATGAAAACTGCTTCTCAAGCACTTGCTGGTTATGTGAAACTGACTGGTGATGAAACTAAGAATCAGTTAGCGGTTCAGCAGAAAATTGCTGAAGTATACAACCAGACTAAGGATAAAGAAAAAGCACAGGAAGCAGGTAGACATCTGGAAGTTCAACAGTTAGAAGAACAGGAAGCAGCTCTCAAGCGTGTACTAGAAACTAACAAGGGCAACAAAGCAATTGAAAATGAAATTGCTAAGATTCAGTTAGAGAAGATCAAGATTGCCAATCAGGATATGGAAGCTCAGAAGAAGGTTAAGGATTACACGGATAAAATCCTTGGTGTTGATCGTGAGATTGCTCTGCTTAATAACCGTACTATGACAGATACTCAGTATAGGTTAGCTCAGTTGAACCTTGAACTGACTATCGAGAAAGAGAAGTATGCATGGTACTCTAAGCAGGTCGACAAACAGAAGGATGCTGAACAATCAAGACGTGCTCAGGCACAGATTGAGCGTGAAATCTGGAAAGCTAGGTTAGATAATATATCCAGAGTTGCAGCAAAAAGACAGGAAGCATTTGAGAATACATTAACTGGCATGTACCCTCTAGCAGGGGAAATGCAAAAGATGGAAATGCAGTTAGAATTCTATAAACAAATGAAAGAGTTTACTAAAGGTAATGCGGATGAACAGATGCGATGGAATTCTGAGATATCAAAAACTCAAGCACAAATGTCCGCATTAGCAGCCCAAAGAAATGCTCAAATGCAACAACAAGTAGGTTCATCTGTAGGAGCTACATATACACCTACAACTGGACTATCTGGAGATGACAAAGCTTTCGCGGATATGCAGAATAGAATGGCATCCTATGACCAGGCTATTTCTAAGCTGTCTGAATTGAACTCCGAAGCAACTGCTGTAGCACAAAGCATGGGTAATCTAACTAATGCTATGATCCAGTTCTCTCAAGGATCTCTGGATACTACCTCTCTAGTAGCGGCTGGTATGCAAACTGTGTCTTCAATGATTCAGTATAGTGTTAGTCAACAGGTAAGTGCTATTGATGCAGCTATTGCAGCAGAGCAAAAACGTGACGGTAAATCCGAAGCATCTAAAGCTAAGCTCAAGAAACTGGAAGCGGAAAAGGTTAAGATCCAGCAGGATGCAGCTAAGAAACAGATCATAATTCAGACGGCAGTAGCGGTGATGCAAGCAGCAACAGCTGTTCCTTACCCGTGGTCTATCCCTCTTATGATTGCAGCAGGTGTTGCAGGTGCGTTGTCTCTTGCACAAGCATCCTCTGCATCTGGTATGTCTTCTATTGGAGACTCTGGTACTGAGACAGCTCAATACTTGTCTCTTGGAGAACGCCAGAAGAACGTAGACGTTTCTATGTCAGCTAACGCAGGTGAGCTTTCTTATATTCGAGGAGATCAAGGGATTGGTAATGCGAACTCTTTCGTACCTCGTGCAGAAGGTGGTAATATGTATCCTGGAGTTAGTTACCAGATGGGTGAGCATGGTACCGAAGTAATCACTCCTATGGTTCCGATGAAGGCTACTCCTACTGATGAACTAAAAGGATCTTCAAATGGTACATCGGGTAGACCTATTGTGCTGAACATTAGTACGATGGATGCGGCTAGCTTCAGAGACTTTGCTTCGAGTAACAGTGCTGCTTTCAGGGATGCCGTGGAACAGGCTCTTAATGAGAATGGAACCACCCTGAAATCACTTGGTAATTCTTAA

Tertiary structure

PDB ID
af542bd6e26fc147071777f2dffc4a581386ed2a768fd662d994a06e817a968a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3035
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural Occurrence of Escherichia coli-Infecting Bacteriophages in Clinical Samples Pacifico,C., Hilbert,M., Sofka,D., Dinhopl,N., Pap,I.-J., Aspoeck,C., Carrico,J.A. and Hilbert,F. 2019 — GenBank