Protein

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Genbank accession
AIX44948.1 [GenBank]
Protein name
putative short tail fiber
RBP type
TF
Evidence RBPdetect
Probability 0,76
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MSFYQSVRQMKAAVIGSIIPWSGPLSGIPDGWIICDGSQPDARDYPLLVQAIGDTYNEGTSNLGGGFPNYSGEFKLPDLLGGRALVDIEGSYFAPAGAGGTGNVIDTDTGARPLIEPFIGENTDNGINTVFNDVTTDVVFTLNDRNDYVGAISGNEAVPGQGERSIFIGGRKLGHQHIRNHQHPGTYETIGSPTSQRPGLGVIPYDNITMTVNYAAYDETSDILDLFGDSVDTVRIGLEWYREDTELVDNGSLAEVVSEGYSGFGGGSPGRMVGRINSENPPINLSAGNLSDSPLAVWGEWQPLPSTPSSGRPILSQDDEIPYGLFGEVFTIPDGFRNYYPDQLSAGAYGTFVSNEGSDFLDDAIQAHVHDPFQVVFDQNSLKPQPRLNSSLNVPNATLDNASNAGSLQINMNTAQPTLTCVYIIRAY
Physico‐chemical
properties
protein length:428 AA
molecular weight: 45887,94660 Da
isoelectric point:4,23174
aromaticity:0,09346
hydropathy:-0,29159

Domains

Domains [InterPro]
IPR037053
6–79
IPR037053
SSF88874
7–75
SSF88874
IPR011083
16–74
IPR011083
AIX44948.1
1 428
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage ACG-2014e
[NCBI] 		1493510 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIX44948.1 [NCBI]
Genbank nucleotide accession
KJ019156 [NCBI]
CDS location
range 31361 -> 32647
strand +
CDS
ATGAGTTTCTATCAATCAGTTAGACAGATGAAAGCTGCCGTTATAGGCAGCATCATCCCTTGGAGTGGTCCTCTATCCGGAATTCCGGATGGGTGGATTATTTGCGATGGAAGTCAACCAGACGCAAGAGATTATCCTTTGCTTGTACAAGCAATTGGTGATACTTACAATGAGGGAACTTCAAATTTGGGAGGGGGATTTCCAAATTATAGTGGAGAATTTAAACTTCCTGATCTTCTTGGTGGAAGAGCTTTAGTTGATATCGAAGGATCATATTTTGCACCAGCTGGTGCTGGCGGAACGGGAAATGTTATTGATACTGATACTGGTGCTAGACCATTAATTGAACCATTTATTGGTGAAAATACAGATAATGGTATTAATACTGTTTTTAACGATGTAACTACAGATGTTGTTTTTACACTTAATGATAGAAATGATTACGTTGGAGCAATTAGTGGAAATGAAGCAGTTCCTGGACAGGGAGAAAGATCAATTTTTATTGGTGGACGAAAACTAGGACATCAACATATCAGAAATCATCAACACCCCGGAACATATGAAACTATTGGAAGTCCTACATCACAACGTCCTGGTCTAGGTGTTATACCATATGATAATATAACAATGACCGTTAATTATGCAGCATATGATGAGACTAGTGATATTCTCGACCTTTTTGGTGATAGTGTTGATACCGTTAGAATTGGTTTGGAATGGTATAGAGAAGATACAGAATTGGTTGATAACGGTTCTTTAGCTGAAGTTGTTTCAGAAGGGTATAGTGGTTTTGGTGGAGGCAGTCCTGGAAGGATGGTTGGTAGAATTAACTCAGAAAATCCTCCAATTAACTTGTCAGCTGGTAATCTTTCGGATAGTCCGCTTGCAGTATGGGGAGAATGGCAACCATTACCATCAACACCATCTAGCGGTAGACCTATTCTTTCACAAGATGATGAGATTCCATATGGTCTTTTTGGTGAAGTTTTTACTATTCCTGATGGATTTAGAAATTATTATCCCGATCAACTATCAGCGGGTGCATATGGAACGTTTGTGAGTAATGAAGGATCTGATTTCTTGGATGACGCTATACAGGCACACGTACATGACCCATTTCAGGTCGTTTTTGATCAAAATAGTTTGAAACCTCAACCTAGATTGAATTCTTCTTTGAACGTTCCTAATGCTACTCTTGATAATGCTAGCAACGCTGGTTCTTTACAAATTAATATGAATACAGCACAACCAACATTAACTTGCGTATACATCATCAGGGCATACTAA

Tertiary structure

PDB ID
3a406b2837b30a4f6d2255e8c7acfa45607866c45869ed4980e420382fbbed39
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3885
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecological redundancy of diverse viral populations within a natural community Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B. 2015-03-20 — GenBank