Protein

View in Explore
Genbank accession
WGH49928.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSSIKVPDTISKLSPDDSYPVVEGVDVGGFPELQAKVTEHETKITTNVDAIKALEPVGKTFTFVGKTTPTYTNAPHGNYVVSIRALQNSIDVYGPLHDNLLDGTIFTIHNEDFTDTIKLRPGDSAYTFEYASMINMLPETFATYVYRSDKKVFVQLESGYLPTSKVNLSSTIKSQIEADGYIRSFPVDGDGGTHSLGANAFEFEGATISQGSKPNIAKVTITGGGSGTVISLKDKENTTWSPVSNIYFPQAEFNQDGTWTKVTFPVGSNGITMIDKDGDSAPNITSATFNNMNITHDGNGNAVINQQTGIDVGAGGNTYNAIEKINFNNMNPTVDSQDGSLYLTPTASGSIDVEDLDAPNSFIDAANLKFHHTNITSDPNDQDALILTPYIKMGGHHTNNITLDDNFVFKDDGSNNGTLEIKHGAFEKGQAPGFFSYLKSNEFVRTNNPDYTDDENYKYKAGIFPTELSVTPNAFLNIDMTKKELQLQEVDMLDPNVTGGTDFLIIFRAAMVGKAMTSGRISTVVIDDATNKPLLDISGNPFIFSKWVDVGDDLGVMHSLGIANFKGVRGITFHVNTSWDLQEFPLELGNRTNGGTCVMAQALTSTSRTGEALQQYELDTNQSVMFDTYHLGKDHYNIHTAIDDRDPLDIALSADQHLKLPDGAFVYSKYGNLITTTNNVLEISGIPNVNSDFALVKTFSADETLAMKGKDINVTMNISNPTVGVDLYLAIWEGAPNEYTYDFIKGRNQNGSPMTAANWVIKDILYHDSKPDNAYYNINKTFTIPRGVSDTNYAIVIVPSSEVYSDSIKIKDLQVDVAEPFNTYYIHGLKDKNESHLIYDPGYVRFWLANLYYASFRYTMDSKETPYPCGYVIRGKGPVVQDQTYNMVPGSVNNKGEGGMKFLEDGIANLNTKLLLWSEKDHNTTATFWWAKVMPDGTFSEIPETRTVFNVESGWKEVQCKMKEANVKVAADEILVLRGMSSELDGAFLESTDKSNPLVITDVIFTGLVSSSLYDDPELISSPMDAKLQVDRRVFEFSNNQSPNIVIDLNIEDGVELANYSAVHMSNNKVIPLTNAEFSYDSVLKKLTVHVGNNVTEGKIYLEFWG
Physico‐chemical
properties
protein length:1106 AA
molecular weight: 121810,55900 Da
isoelectric point:4,70140
aromaticity:0,09855
hydropathy:-0,31474

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WGH49928.1
1 1106
Domain Start End Length (AA) Confidence
N-terminal 1 403 403 0,9025
Central domain 404 646 244 0,6518
C-terminal 647 1106 459 0,7379
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-403
Central
404-646
C-terminal
647-1106

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudoalteromonas phage vB_PtuP_Slicky01
[NCBI] 		3038240 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WGH49928.1 [NCBI]
Genbank nucleotide accession
OQ508958.1 [NCBI]
CDS location
range 20846 -> 24166
strand +
CDS
ATGAGTTCAATTAAAGTACCAGATACTATATCAAAACTAAGTCCCGATGACTCATACCCTGTAGTAGAAGGGGTAGATGTCGGAGGATTCCCAGAGTTACAAGCTAAAGTAACAGAACATGAAACAAAGATTACAACCAATGTAGATGCCATCAAGGCATTGGAACCTGTAGGTAAGACCTTTACCTTCGTGGGTAAGACAACACCTACATACACAAATGCACCACATGGTAACTATGTTGTTTCCATTAGAGCCTTACAGAATTCAATAGATGTATATGGCCCTTTACATGACAACTTACTAGACGGTACTATCTTTACAATACACAATGAAGACTTTACAGATACTATTAAACTAAGACCTGGGGATTCTGCATATACATTCGAGTATGCATCAATGATTAACATGCTACCAGAAACCTTTGCTACTTATGTATATAGGTCTGATAAGAAAGTATTCGTACAGTTAGAGAGTGGTTATCTCCCTACGTCTAAGGTTAACTTAAGTAGCACAATCAAGAGTCAGATAGAAGCTGACGGTTACATTAGAAGTTTCCCTGTTGATGGTGATGGTGGTACTCATAGCTTAGGTGCTAATGCCTTTGAGTTTGAAGGAGCTACAATATCACAAGGTTCTAAACCTAACATAGCTAAGGTAACTATTACTGGTGGTGGTAGTGGTACAGTTATATCCCTTAAGGACAAAGAGAATACTACATGGAGTCCTGTTAGTAACATATACTTCCCTCAGGCTGAGTTCAACCAAGATGGTACTTGGACAAAGGTAACATTCCCTGTAGGTTCCAATGGTATAACTATGATAGATAAGGATGGTGATTCAGCCCCTAACATTACTAGTGCTACGTTCAATAACATGAATATAACACACGATGGTAATGGTAATGCTGTGATAAACCAACAGACTGGTATTGATGTAGGTGCAGGTGGTAATACATATAATGCTATTGAGAAGATTAACTTCAATAACATGAACCCTACTGTGGATTCACAGGATGGTAGCTTATACTTAACCCCCACGGCCTCAGGATCTATAGACGTTGAGGACTTAGATGCCCCTAACTCTTTCATTGATGCAGCTAACTTAAAGTTCCATCATACTAATATAACTTCTGATCCTAATGACCAAGATGCTTTAATCCTGACCCCTTACATTAAGATGGGTGGACATCATACTAATAACATAACCTTAGATGATAACTTTGTATTTAAGGATGATGGTAGTAACAATGGAACCTTAGAGATTAAGCACGGTGCCTTTGAGAAAGGTCAAGCACCGGGATTCTTTAGTTACCTTAAGAGCAATGAGTTCGTTAGGACTAACAATCCTGACTACACAGATGATGAAAACTACAAGTATAAGGCTGGTATATTCCCTACGGAACTTTCAGTAACCCCTAATGCTTTCCTCAATATAGATATGACTAAGAAAGAACTACAGTTACAGGAAGTTGATATGTTAGATCCTAATGTAACTGGTGGTACTGACTTCCTTATAATCTTTAGGGCTGCTATGGTAGGGAAAGCTATGACATCAGGTAGGATTTCAACTGTAGTTATAGATGATGCAACTAATAAACCTCTGTTAGATATCTCAGGTAATCCATTTATATTCTCTAAGTGGGTAGATGTTGGTGATGACCTAGGTGTTATGCATTCTTTAGGTATTGCCAATTTCAAAGGTGTACGAGGGATTACATTCCACGTGAATACCTCATGGGATCTACAGGAATTCCCATTGGAGCTAGGTAATAGAACTAATGGTGGTACCTGTGTAATGGCTCAGGCTTTAACATCTACTTCTAGAACTGGTGAAGCATTACAGCAGTATGAGTTAGATACTAACCAGAGTGTTATGTTTGATACATATCACTTAGGTAAAGATCATTATAATATCCATACTGCTATTGATGATAGAGATCCTTTAGACATTGCGTTATCAGCAGATCAACATCTTAAACTACCTGATGGTGCTTTTGTATACTCTAAGTATGGTAACTTAATTACTACCACTAACAATGTCTTAGAGATATCAGGTATCCCTAATGTTAATTCTGACTTTGCTTTAGTTAAGACCTTTAGTGCCGATGAGACTCTAGCAATGAAAGGGAAAGATATAAATGTAACTATGAATATTAGTAACCCTACAGTTGGTGTTGATTTATACCTAGCTATCTGGGAGGGTGCTCCTAATGAATATACATATGACTTCATTAAGGGTAGGAATCAAAATGGTAGTCCTATGACAGCAGCTAACTGGGTTATTAAAGATATTCTATATCATGATTCTAAACCAGATAATGCTTACTATAATATAAATAAAACATTCACTATCCCTAGGGGAGTTTCAGATACCAACTATGCTATTGTAATAGTTCCATCTTCTGAGGTTTACTCTGATTCCATTAAGATTAAAGATCTTCAGGTAGATGTAGCTGAGCCATTCAATACATACTACATACATGGCCTCAAGGATAAGAATGAAAGTCACTTGATCTATGATCCTGGGTATGTAAGGTTCTGGTTGGCTAACCTATACTATGCTAGCTTTAGGTATACTATGGATTCAAAGGAAACTCCATACCCTTGTGGTTATGTTATTAGAGGTAAAGGTCCTGTAGTACAAGATCAAACTTATAACATGGTACCTGGTTCAGTTAATAATAAAGGTGAAGGTGGTATGAAGTTCTTGGAGGATGGTATTGCTAACTTGAATACTAAGTTACTACTTTGGTCAGAGAAAGATCATAACACCACTGCTACATTCTGGTGGGCTAAGGTAATGCCTGATGGTACATTCTCAGAAATACCTGAGACTAGAACTGTTTTTAATGTAGAGTCTGGATGGAAGGAAGTACAATGTAAAATGAAGGAAGCTAATGTTAAAGTAGCTGCTGATGAGATCTTAGTACTACGTGGTATGAGTAGTGAGCTTGATGGGGCTTTCCTAGAATCTACTGATAAGAGTAATCCTTTAGTTATTACTGATGTAATCTTTACAGGTTTAGTATCAAGTAGTCTATATGATGATCCTGAGTTAATCTCTAGTCCTATGGATGCGAAGTTACAGGTTGACAGGAGAGTATTTGAATTCTCTAATAACCAATCACCTAATATAGTAATTGATTTAAATATAGAAGATGGCGTAGAACTGGCTAACTATTCAGCAGTACATATGTCTAACAACAAGGTAATACCATTAACAAACGCTGAGTTTAGTTATGACTCAGTACTCAAGAAGCTGACTGTGCATGTAGGTAATAATGTTACAGAGGGTAAGATTTACTTAGAATTTTGGGGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
66708298133654e036850acf4c349248d9b8ea49b984b2831a57ff9943dd7714
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4043
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecogenomics reveals distinctive viral-bacterial communities in the surface microlayer of a natural surface slick Rahlff,J., Wietz,M., Giebel,H.-A., Bayfield,O., Nilsson,E., Bergstrom,K., Kieft,K., Anantharaman,K., Ribas-Ribas,M., Schweitzer,H.D., Wurl,O., Hoetzinger,M., Antson,A. and Holmfeldt,K. 2023 — GenBank