Protein

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Genbank accession
YP_010300206.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLQQSCLYARGITPVFSGSPGNGTEAAVDAMGVDASRFTSFVVDGHALAYVCGFGSVFMNGRFVRDGSPLVDASYGWLGNYRNKTINNMGALRHFLTQRGYNSNITNGTSMLVISDLAPVNDDTSMESWGQLVGYMQRMPLDMLAHSWQEINAGAYGYDGSYKYFKQFSCVMLLLSATNQSMPTAMLTALREAHRNGVSLIVLQKNAYEGNVNFNAIFNPLGIRSNGQAYVVSTKAAHDKSINALGNHVAWTNVPQLHNQINYRTSAIYQFNTTPPAGPSSLGGQPGAWKQLYCGQVDIPDDVILDPAIIYRDPCCVEPGSAYGVNFDVTTYPYKPDDWAARLAAGDVSVTWSNQNGQALQARSRLFSHVVGYQRHLDTGDYGYTVYNGTQYNDTRGLNVYKIRKSDLALLERRSFDIHASAEGTNPGVANAAACAAFLNSIGTDCYVFVVSYDTADVNRVQGGLPAAMYRIGASRRVFQGSQYVYRAAYCVFGEPGIGEGSAHTELYWGPKSSSPDSYYSVGFDFDSGNVPYCTGTDRDGTLALGITGLFENTKSAHESYYKVLGGMDGGQTYGMKHTVTIRDNRFKKLPMYETKNFVVSVTNPCFPVPKVQSHDWVHRVNRAGSSYVRYAFKDLNEYLLTTSDGSGQNEMCTSHLMMNWDMFSSIGSGTIYNSAGASHKVYCGTSNGNINDPSSLYINTTEEGKVWHVYERPYQLITELPDRDTNDWQVVWRWKGVGTQGHNIQIEAGFEYIVFAYDRYGEIELAERHFFVPPAEYLPKWGSNYYCRDFSNSTTFTVDRALRCNAYCEKSSDNGGQNGIMMIIRRPLFLTTGSADRTGWECIFNNNSATVPRGNNYSIPCVKDYQYMVLCSVGDGAYSSHHFNAWNGAFDMVWEGLFEADSGGRASWIANLQTLMQSGNSGGRTMDCFIDGGRADPIGVFQVWRRPILCWEPSEIE
Physico‐chemical
properties
protein length:958 AA
molecular weight: 106083,24950 Da
isoelectric point:5,89281
aromaticity:0,12422
hydropathy:-0,32672

Domains

Domains [InterPro]
DC_0476
STR
1–958
DC_0476
PS52031
LEC
380–538
PS52031
IPR039477
STR
396–497
IPR039477
YP_010300206.1
1 958
Architecture
STR
STR 1-958
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010300206.1
1 958
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0068
Central domain 11 218 209 0,8734
C-terminal 219 958 739 0,5784
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-218
C-terminal
219-958

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_35
[NCBI] 		2869557 Uroviricota > Caudoviricetes > Alexandravirus >
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010300206.1 [NCBI]
Genbank nucleotide accession
NC_061442 [NCBI]
CDS location
range 64204 -> 67080
strand -
CDS
ATGCTACAACAAAGTTGCTTGTATGCTAGGGGCATCACTCCAGTATTCAGCGGCAGTCCTGGCAATGGCACAGAGGCTGCGGTAGATGCTATGGGTGTCGATGCCTCACGTTTTACGTCATTCGTTGTAGACGGACACGCTCTAGCTTATGTGTGCGGCTTTGGTTCTGTGTTTATGAATGGTCGCTTCGTGCGAGATGGTAGCCCGCTGGTGGATGCCTCATACGGGTGGCTTGGCAACTACAGAAACAAGACCATCAACAACATGGGCGCGTTGCGTCACTTCCTGACACAGCGTGGTTACAATTCAAATATCACTAACGGCACTTCCATGCTTGTCATCTCTGACTTAGCTCCTGTCAATGATGATACATCCATGGAGTCCTGGGGTCAGCTTGTTGGTTACATGCAGCGTATGCCTTTGGATATGCTTGCACACAGCTGGCAGGAAATCAACGCTGGTGCATACGGATATGACGGCTCGTATAAGTATTTCAAACAGTTTAGCTGTGTAATGCTTTTGTTGTCCGCCACCAATCAAAGTATGCCCACGGCAATGCTCACCGCGCTCCGTGAGGCGCACCGCAACGGCGTTAGTTTGATTGTATTGCAGAAGAACGCATACGAAGGTAACGTGAACTTCAATGCTATCTTCAACCCACTAGGCATTCGCAGTAACGGACAGGCATACGTCGTCTCCACAAAGGCTGCGCACGATAAGAGCATCAACGCATTAGGCAACCATGTTGCTTGGACGAATGTTCCGCAGCTCCATAATCAGATTAACTATCGCACGTCTGCAATCTATCAGTTTAATACAACCCCTCCAGCAGGACCTTCTTCACTCGGAGGGCAGCCTGGTGCGTGGAAACAACTGTATTGTGGTCAGGTTGATATTCCAGATGATGTGATTCTCGACCCAGCTATTATCTATCGTGACCCATGCTGTGTGGAGCCGGGCTCGGCGTACGGTGTTAACTTCGATGTTACTACCTACCCATACAAGCCTGATGATTGGGCAGCTCGTCTTGCTGCTGGGGATGTGTCTGTCACGTGGTCGAATCAGAATGGCCAAGCGTTGCAGGCGCGTAGCCGACTGTTCTCGCATGTAGTAGGCTATCAGCGTCATCTCGATACAGGTGATTACGGCTACACTGTTTACAACGGTACCCAGTATAACGATACGCGCGGCCTGAACGTCTATAAGATTCGTAAATCAGATCTTGCGCTGCTTGAACGTCGCTCGTTTGATATTCACGCATCTGCGGAAGGCACTAACCCGGGCGTTGCTAACGCTGCTGCCTGTGCTGCGTTCCTCAACTCAATCGGCACCGACTGTTATGTCTTCGTTGTGTCGTATGATACAGCCGACGTTAACCGTGTACAGGGCGGTCTGCCTGCTGCTATGTATCGCATTGGTGCTTCGCGCCGTGTGTTCCAAGGCAGTCAGTATGTGTACCGTGCTGCATATTGTGTGTTCGGCGAGCCTGGTATTGGTGAAGGTTCGGCGCACACAGAACTGTACTGGGGCCCTAAATCAAGCTCACCGGATAGCTACTACTCGGTAGGCTTTGACTTCGATTCCGGTAACGTTCCTTATTGCACAGGTACAGATCGTGATGGTACACTTGCGTTGGGCATTACTGGTCTGTTCGAAAACACCAAGAGTGCGCATGAGTCGTACTACAAAGTGTTGGGCGGAATGGACGGTGGTCAAACATATGGCATGAAGCACACGGTAACGATTCGTGATAACCGCTTCAAGAAACTGCCTATGTACGAAACTAAAAACTTCGTCGTGTCTGTCACTAACCCATGCTTCCCTGTGCCGAAGGTTCAATCGCATGACTGGGTGCATCGTGTCAACCGTGCTGGTTCTAGTTACGTTCGCTATGCGTTCAAAGATTTGAATGAGTATCTGCTCACAACCTCCGATGGTAGTGGCCAGAACGAAATGTGTACCTCTCACCTGATGATGAACTGGGACATGTTTAGTTCAATCGGCTCAGGCACTATCTATAACTCTGCTGGTGCATCGCATAAAGTTTATTGCGGTACGTCTAACGGTAACATCAACGATCCTAGTTCTCTGTATATCAACACGACAGAAGAAGGGAAAGTGTGGCATGTGTATGAGCGTCCTTATCAGCTTATCACTGAACTGCCTGACCGTGATACGAACGATTGGCAAGTTGTCTGGAGATGGAAGGGCGTCGGCACTCAGGGACACAATATCCAGATTGAAGCAGGCTTTGAGTACATCGTATTTGCGTATGACCGCTACGGTGAAATTGAACTTGCTGAACGTCATTTCTTCGTACCACCAGCAGAGTATCTGCCTAAGTGGGGTTCGAACTACTACTGCCGTGACTTCTCCAACTCAACTACCTTTACCGTTGACCGCGCCTTGCGCTGTAATGCGTACTGCGAAAAGTCTAGCGATAACGGCGGGCAGAATGGTATCATGATGATCATTCGTCGTCCCCTGTTCTTAACAACAGGTTCGGCGGATCGTACTGGTTGGGAGTGTATCTTCAACAATAACAGTGCGACTGTTCCTCGTGGTAACAACTACAGCATCCCATGCGTGAAAGACTATCAGTACATGGTTCTTTGTAGTGTTGGCGACGGTGCGTATTCATCGCATCATTTCAATGCGTGGAACGGTGCGTTCGATATGGTATGGGAAGGGCTGTTCGAAGCTGATTCTGGAGGTCGTGCTTCTTGGATTGCCAACTTGCAGACGTTAATGCAGAGCGGCAACTCCGGCGGTCGCACCATGGATTGTTTCATTGATGGTGGCCGAGCTGACCCTATCGGTGTGTTCCAAGTGTGGCGCAGACCTATCCTTTGCTGGGAACCGAGTGAAATCGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9ade2fa63736ed07c2c7052f9ee0f1938e1a0776ad4e87c709a4e02f65d8661e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4136
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_35 Kim,S.G. and Park,S.C. 2021-01-07 — GenBank