Protein

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Genbank accession
QBP07041.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MKLQQFNGGLHARPRPQFIDLSQGVVYENINQEAGSLAPVMLPKDSGQAVLPYHTFYVAGNKWVSSNIQRYYVEFQKTLYWCDGIGLPQKLNMRGAQTNLGLAAPSTKASFRAVDNPGVVSDVEVKRTEAAGSGLPSELHVYVIVNVDGDAFSNALQLTVDTKGTVNTIAESTPKPIIQPKINSDTSTTKYQVSIGQVKGVTIGSGGVQVYRQYNNKFRLVGTITNGTATVADTVYDIGTNLELDFTKFGALQGVYQYVTTFVNSNDGAESAPSALSEELDLKGGGSIYAYGFPQSEDRQVDKMRLYRVGGNLGEFTLVKELPIATLDYTDATSDASLPGTLLTTQNAASAPAGLKYMREAYAMLFAAEGSKLRFTPVGRPNEWPETFFLQYDADITGIAPVANGILVFTEYRTHIVTGNGPSVLSTYLLSGDQGCISNESIQFVGAEALWVSSDGICVSSGAQINVITRELLGKLDIRPVDSAVYDGQYYVMTDSGLIYCINNGTVKHFRFDISSLAVANDKLYGYNNGTLWELFASTDPAVMRFKSALMTEGSFTLNKVYKKIFTYSAGHIIIRILINGTIVVERVLSGEDSFDIQVPQELQRGFNLQFEVEGTGEVSELEYVVGA
Physico‐chemical
properties
protein length:628 AA
molecular weight: 68274,14820 Da
isoelectric point:4,98645
aromaticity:0,10032
hydropathy:-0,08424

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBP07041.1
1 628
Domain Start End Length (AA) Confidence
N-terminal 1 513 513 0,9234
Central domain 514 617 105 0,0434
C-terminal 618 628 10 0,2247
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-513
Central
514-617
C-terminal
618-628

Taxonomy

  Name Taxonomy ID Lineage
Phage Edwardsiella phage ETP-1
[NCBI] 		2544920 Uroviricota > Caudoviricetes > Kafunavirus >
Host Edwardsiella tarda
[NCBI] 		636 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBP07041.1 [NCBI]
Genbank nucleotide accession
MK574011 [NCBI]
CDS location
range 30322 -> 32208
strand -
CDS
ATGAAACTTCAACAGTTTAATGGCGGGTTGCATGCCCGCCCTCGCCCGCAGTTCATTGACTTGAGCCAGGGCGTTGTATATGAGAATATTAACCAAGAGGCAGGTAGCCTCGCACCTGTAATGCTACCTAAGGACTCTGGTCAGGCTGTGCTGCCTTACCACACGTTCTACGTCGCGGGTAATAAGTGGGTTAGTTCTAACATTCAACGCTATTACGTTGAGTTCCAGAAGACTTTGTACTGGTGCGACGGCATAGGCCTGCCACAAAAGCTGAACATGAGAGGGGCACAGACCAATTTAGGGCTTGCTGCGCCTAGCACTAAGGCGTCGTTCAGGGCTGTCGATAATCCTGGCGTTGTATCTGACGTGGAGGTCAAGCGTACAGAGGCAGCTGGTTCTGGCTTGCCTAGTGAGCTGCATGTTTACGTTATTGTCAACGTAGACGGCGATGCTTTCTCTAACGCGTTGCAGCTGACTGTAGACACTAAAGGCACTGTCAACACTATAGCGGAGTCTACACCTAAGCCCATAATTCAACCCAAGATCAATAGTGATACTTCTACGACTAAGTATCAGGTGTCAATTGGTCAAGTAAAAGGTGTAACCATTGGCTCAGGTGGAGTGCAGGTGTATAGGCAGTACAACAACAAGTTTAGGCTTGTCGGTACTATCACTAATGGCACTGCTACTGTGGCGGATACTGTGTATGATATTGGCACTAACCTTGAGCTGGACTTTACTAAGTTTGGAGCGTTACAAGGTGTGTACCAGTATGTAACAACTTTCGTGAATAGCAATGACGGTGCTGAGTCTGCTCCATCTGCTTTGTCAGAGGAGCTAGACTTAAAAGGCGGTGGCTCAATCTATGCTTATGGCTTTCCGCAGTCAGAAGACCGACAAGTAGACAAGATGCGGCTGTACCGTGTAGGCGGCAACCTTGGTGAGTTTACATTAGTTAAAGAGCTACCCATTGCCACGTTAGACTACACGGATGCTACATCTGACGCCTCACTGCCTGGTACGCTGCTAACTACGCAGAATGCTGCGTCGGCGCCAGCGGGTCTAAAGTATATGCGTGAGGCTTACGCAATGCTGTTCGCGGCAGAAGGCTCTAAGCTTAGATTCACGCCCGTAGGCCGGCCTAACGAGTGGCCCGAGACCTTCTTTCTGCAGTACGACGCAGACATTACAGGGATCGCACCCGTAGCTAACGGTATTCTCGTATTCACAGAGTACCGTACGCACATCGTAACAGGTAACGGGCCTAGCGTGCTATCTACATATCTGCTTAGCGGTGACCAAGGCTGTATCAGTAATGAATCTATCCAGTTTGTTGGTGCAGAAGCACTGTGGGTATCTTCTGATGGTATCTGTGTCTCGTCCGGCGCGCAGATAAACGTTATCACACGAGAGCTGTTAGGTAAGCTCGATATTCGGCCGGTAGACTCTGCTGTATATGATGGCCAATACTATGTTATGACTGACTCCGGGCTTATCTACTGCATCAACAATGGCACTGTGAAGCACTTCAGATTTGACATTAGCTCATTAGCTGTTGCTAACGATAAGCTATATGGTTATAACAATGGCACCCTGTGGGAGTTGTTCGCGAGTACTGACCCTGCTGTCATGCGCTTCAAGTCTGCGCTGATGACGGAAGGCTCCTTTACACTGAATAAAGTCTACAAAAAAATATTTACATATTCAGCGGGTCATATTATAATAAGAATATTAATTAACGGGACTATTGTGGTTGAAAGGGTACTTAGTGGCGAAGACTCATTCGACATTCAAGTACCTCAAGAGCTGCAACGAGGGTTCAACCTGCAGTTTGAGGTTGAAGGTACTGGCGAAGTATCGGAGCTTGAATATGTCGTCGGAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
79d2d8307a49218057a0c13621377de5be5dcbc56f802a010c260329c15daae8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8587
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence of multidrug-resistant Edwardsiella tarda isolate infecting lytic phage ETP-1 Nikapitiya,C., Senevirathne,A., De Zoysa,M. and Lee,J. 2020-01 — GenBank