Protein

View in Explore
Genbank accession
URA07096.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,61
Protein sequence
MGLVSQSVKNLKGGISQQPDILRFSNQGALQINGWSSETQGLQKRPPTTFTKRLQNKGFLGTKPLVHLINRDAQEQYFVGFSGTGLAVWDLKGNNYTVRGYNGYANCANPRTDLRLITVADYTFVVNRNTVCQMGSTLTNPSYPRLDGRAIINVRGGQYGRTLSITINGDGTGSSPQASIKMPNGSAEKVPAGDPYAGMNQVDMTDASWIAAELARQLTVSLGGSGWSFQAGTGWILINAPANDNIRQIATKDGYADTLLSGFIYQVQTFTKLPANAPPGYLVEITGESARSGDNYWVQYDASGKVWKETAKPKIIAGFNNATLPHALVRAADGQFDWTPLTWDGRNAGDDDTNPMPSFVGAAINDVFFFRNRLGFLSGENVVMSRTSKYFNFFPSSVATLSDDDPIDVAISHNRISILKYAVPFSEQLLLWSDQAQFVLSSNGILSSKTIELDLTTEFDVSDGARPYGIGRGVYFAAPRASFTSLKRYYAIQDVSDVKSAEDVSAHVPSYITNTVHAIHGSGTENFVSILSDGSPNKVFIYKFLYLDEILQQQSFSHWEFGDAATTRVLAASCIGSYCYLMIDRPEGLCLERMEFTQHTIDYSIEPYRTYMDMKKTIVLGGYNIDTNLTSFDVRTAYGGTPGPESTFYTIDQQGVLIEHEARDWATNPYISFVGNRAGEQMVIGKQYTFQYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWLNYEESGAFEINVNNGSSEFVYVMTGGRLGIQRVLGELSVGTGQFKFPVTGNAVNQRVTITSSNPNPLNVIGCGWEGNYIRRSSGI
Physico‐chemical
properties
protein length:808 AA
molecular weight: 88856,41940 Da
isoelectric point:5,65528
aromaticity:0,11139
hydropathy:-0,27141

Domains

Domains [InterPro]
IPR058003
TTP
1–808
IPR058003
URA07096.1
1 808
Architecture
TTP
TTP 1-808
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URA07096.1
1 808
Domain Start End Length (AA) Confidence
N-terminal 1 141 141 0,9914
Central domain 142 340 200 0,2910
C-terminal 341 808 467 0,1744
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-141
Central
142-340
C-terminal
341-808

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage Laurelin
[NCBI] 		2939130 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URA07096.1 [NCBI]
Genbank nucleotide accession
ON189046 [NCBI]
CDS location
range 24811 -> 27237
strand +
CDS
ATGGGACTCGTTTCGCAATCCGTCAAGAACCTCAAAGGAGGTATCTCGCAACAACCAGACATCCTTCGGTTCTCCAACCAAGGCGCTCTGCAAATCAACGGGTGGTCATCGGAGACTCAAGGTCTTCAGAAGCGGCCACCAACCACCTTCACCAAGCGGCTCCAGAACAAGGGTTTCCTCGGCACCAAGCCGCTGGTTCACCTCATCAACCGGGACGCCCAAGAGCAATACTTTGTGGGCTTCTCTGGGACTGGTCTGGCAGTCTGGGACCTGAAGGGCAACAACTACACCGTGCGTGGCTACAACGGTTACGCCAACTGCGCCAACCCTCGGACTGACCTGCGCCTCATCACTGTGGCCGACTACACCTTCGTGGTGAATCGGAACACCGTGTGCCAGATGGGATCGACCCTGACCAACCCTTCGTACCCACGGCTGGACGGTCGAGCGATCATCAACGTGCGTGGTGGTCAGTACGGTCGTACCTTGTCGATCACCATCAACGGTGACGGCACTGGGTCCAGTCCTCAAGCGTCCATTAAGATGCCCAACGGTTCTGCCGAGAAGGTGCCCGCTGGTGACCCATACGCTGGTATGAACCAAGTGGACATGACAGATGCCTCATGGATCGCCGCTGAGCTGGCTCGGCAACTGACAGTCTCTCTGGGAGGCTCTGGGTGGTCGTTCCAAGCAGGCACCGGGTGGATTCTCATCAATGCCCCTGCCAACGACAACATCCGCCAGATCGCAACCAAGGACGGTTATGCTGACACCCTGCTCAGTGGGTTCATCTATCAGGTCCAGACCTTCACGAAGCTCCCTGCGAACGCCCCACCGGGTTACCTCGTGGAGATCACTGGTGAGTCTGCCCGTTCGGGTGACAACTACTGGGTCCAATACGACGCCTCTGGGAAGGTCTGGAAGGAGACAGCGAAGCCCAAGATCATCGCAGGGTTCAACAACGCAACGCTCCCACACGCGCTCGTGAGGGCCGCTGACGGGCAGTTCGACTGGACACCTCTGACGTGGGATGGACGCAACGCTGGTGACGATGACACGAACCCAATGCCGTCCTTCGTGGGCGCTGCGATCAACGACGTGTTCTTCTTCAGGAACCGTTTGGGTTTCCTCTCGGGTGAGAACGTCGTGATGTCTCGGACCTCGAAGTATTTCAACTTCTTCCCGAGCAGCGTGGCGACCCTGAGTGATGACGACCCAATCGACGTGGCTATCTCGCACAACCGTATCTCGATCCTGAAGTACGCTGTGCCGTTCTCTGAGCAGCTCCTGCTGTGGTCCGACCAAGCTCAGTTCGTTCTGTCGAGTAACGGCATCCTGTCGAGCAAGACCATCGAGCTGGACCTGACCACTGAGTTCGACGTGAGCGATGGTGCCCGTCCCTATGGGATTGGTCGCGGGGTCTACTTCGCAGCTCCACGGGCCTCCTTCACGTCCCTCAAACGGTACTACGCGATTCAGGATGTCTCTGACGTGAAGTCCGCTGAGGATGTCTCTGCGCACGTTCCGAGCTACATCACGAACACCGTCCACGCGATCCACGGGTCTGGTACTGAGAACTTTGTGAGCATCCTTTCGGACGGCTCGCCAAACAAGGTCTTCATCTACAAGTTCCTGTACCTCGACGAGATTCTCCAGCAGCAGTCCTTCAGTCACTGGGAGTTCGGTGATGCGGCCACAACCCGTGTCCTCGCAGCCTCGTGCATTGGCTCCTACTGCTACCTGATGATCGACCGACCAGAGGGCCTGTGCCTTGAGCGCATGGAGTTCACGCAACACACCATCGACTATTCCATCGAGCCTTACCGGACCTACATGGACATGAAGAAGACCATCGTCCTCGGTGGCTACAACATCGACACGAACCTGACTTCGTTCGACGTTCGGACTGCCTACGGTGGAACGCCGGGTCCTGAGTCCACGTTCTACACCATCGACCAGCAAGGGGTTCTCATCGAACACGAGGCGCGGGACTGGGCGACCAATCCATACATCTCGTTCGTGGGCAACCGGGCTGGCGAGCAGATGGTGATCGGGAAGCAGTACACCTTCCAGTACGAGTTCAGCAAGTTCCTCATCAAGCAGACCGCTGACGATGGGTCCACCTCGACCGAGGACATTGGACGCTTGCAGCTTCGTCGTGCGTGGCTGAACTACGAGGAATCTGGTGCCTTCGAGATCAACGTCAACAACGGCTCCAGTGAGTTCGTCTACGTGATGACTGGTGGTCGCCTTGGGATTCAACGAGTCCTCGGTGAGTTGTCCGTGGGTACTGGTCAGTTCAAGTTCCCTGTGACCGGCAATGCCGTCAATCAACGAGTCACCATCACCAGCTCCAACCCGAACCCACTCAACGTGATCGGATGCGGCTGGGAGGGTAACTACATCCGCCGTTCTTCCGGCATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c1364d8da4789433abf2f93b2618613e2a0c98db059443cfe2731caa825ebed0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8980
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of Novel Xanthomonas Phages Infecting the Plant Pathogens X. translucens and X. campestris Erdrich,S.H., Sharma,V., Schurr,U., Arsova,B. and Frunzke,J. 2022 35891434 GenBank