Protein

View in Explore
Genbank accession
AET72641.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MKLKVAQIQGLVTNSNRVTVPENSTVKFKGGRLNVTGTSYFPMPYGDNNGRPVNPENGTVRFNQTTGVMEMYGNGQWVSAVLATGLNVNPTGLLVYLDANNPASYTPGSNTWSDLSGNNNDYTLFNSPTRDIADSSIAFTSAGSQYASRNLDLTGTNQITVEVAAKMSSLAGNAMVFEHTSDWNSNSGAFGAFFNSTGGLSSSPTTDNWIHTNSAVGGKDFNVPSTTAYGLYSFVWRSGTQPLCYYNGQLITNTARTSSATFANFANATNYLATRGGTTFHGDNDATRELDIGYYRIYTRALSFVEINNNYTASKSQYGL
Physico‐chemical
properties
protein length:320 AA
molecular weight: 34465,34470 Da
isoelectric point:6,28664
aromaticity:0,11563
hydropathy:-0,38938

Domains

Domains [InterPro]
DC_0326
STR
1–318
DC_0326
G3DSA:2.60.120.200
STR
91–312
G3DSA:2.60.120.200
IPR013320
STR
97–314
IPR013320
AET72641.1
1 320
Architecture
STR
STR 1-318 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CAM8
[NCBI] 		754038 Uroviricota > Caudoviricetes > Pantevenvirales > Neritesvirus > Neritesvirus scam8
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AET72641.1 [NCBI]
Genbank nucleotide accession
JF974299 [NCBI]
CDS location
range 27309 -> 28271
strand +
CDS
ATGAAGTTAAAAGTTGCTCAGATACAAGGATTAGTTACTAATTCAAATAGAGTAACAGTTCCAGAAAATAGCACTGTAAAATTTAAGGGTGGTAGATTAAATGTAACTGGCACTAGTTATTTCCCTATGCCATATGGAGATAATAATGGTAGACCTGTTAACCCTGAAAATGGAACTGTTAGATTTAATCAGACCACAGGTGTGATGGAGATGTATGGTAATGGGCAATGGGTTAGTGCAGTTCTTGCTACTGGTTTGAACGTTAATCCGACTGGATTACTAGTATATTTGGATGCAAATAATCCAGCATCATATACACCTGGTAGCAATACTTGGAGTGATTTATCAGGAAATAATAATGATTACACATTATTCAATAGTCCTACAAGAGATATTGCTGACAGTTCTATTGCGTTTACTTCTGCTGGATCTCAGTATGCCTCTAGAAATTTAGATCTTACTGGCACCAATCAGATTACTGTTGAAGTAGCGGCAAAGATGAGTTCATTAGCGGGAAATGCTATGGTTTTTGAGCATACCTCAGACTGGAATAGTAATTCTGGTGCATTTGGTGCTTTCTTTAACTCAACGGGAGGTCTTTCTTCTAGTCCTACTACTGATAATTGGATACATACAAACAGTGCTGTTGGTGGAAAAGATTTCAACGTACCTAGCACAACAGCATATGGTTTATATTCATTTGTTTGGCGATCTGGAACTCAACCGTTATGTTATTACAATGGTCAGTTAATAACTAATACTGCTAGAACTTCTAGTGCTACTTTTGCTAATTTTGCAAATGCTACAAATTATCTTGCAACTAGAGGTGGCACAACATTCCATGGAGATAATGATGCGACCCGTGAACTTGATATTGGTTATTATAGAATTTACACTAGAGCACTTTCTTTCGTTGAGATCAATAATAATTACACCGCATCCAAGTCTCAGTATGGTCTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
40e61868e925761f1ee3802e5df7660e51072461dea2c93bda96ea1371cb2a11
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7821
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Synechococcus phage S-CAM8 0608SB47 Henn,M.R., Martiny,J., Weihe,C., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank