Protein

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Genbank accession
ACX71117.1 [GenBank]
Protein name
glycerophosphoryl diester phosphodiesterase
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTGKLIGGIPKQTRLEIELVDVTGTRAVGYAAGDEAEIVRPVPVAPQEDGTWSADLISNALIQADAGDTVWRVQEGRALDGTPVVTYIVVPETGGPHWVGDLRVDLGDAPTGGSTIVYVPGPAGDDGLDGMSAYEVWLEAGNTGAEADYLASLVGPSGAAEAQEYTDTAVAAEAARAAEAYDPAGAAAGAQSAAVTAAAADASSKASAAQSAAVSAAATAAAGLYLPNAVQTVDAYLASASPSSPRFFGHRGGGMVRPEHTLVGYRACAAMGFALEVSVNVDASGELWCLHDLTLDRTTYQTGNLNTYTTEEVGQAVLTNGRTLLGPGWTDQRMVPLRQVLDEFLGKIPILLEPKGNDAVVPCQTLLDTYYPHAPRSVIWKAHIGTLSLPWAKSRGYRTWVYLDPGTTDATMNAKDTNVDYWGVATTFTDQRISEVVARGKPVFAWPVYRRSQVARLTGLGVVGMMSSDPRYVSTSTPQRTFSRWGLAVKESGGTPTLDYDTAYALVFGEGADAGWVSINALPNQSYGLGNYSPIVGSAAGYRIAFDMKHKVLPAGTVHGGYYFGKASDDPYRFTTANATGGYHVVMRASGDMQLYRHTAGVTSGTQVGSTIATTVPVADTAMSFQIDVTPTTVELRRTDGVGWTTGPIADTTYRGGYHGLSNGSITDLATRPFWRNLVITQL
Physico‐chemical
properties
protein length:683 AA
molecular weight: 71920,48430 Da
isoelectric point:4,99134
aromaticity:0,08638
hydropathy:-0,09356

Domains

Domains [InterPro]
DC_2121
ATT
4–310
DC_2121 DC_1530
PTHR46211
Unmapped
222–473
PTHR46211
IPR017946
STR
238–476
IPR017946
IPR030395
ENZ
245–477
IPR030395
IPR017946
STR
245–473
IPR017946
IPR017946
STR
245–470
IPR017946
cd08556
ENZ
248–469
cd08556
IPR030395
ENZ
250–317
IPR030395
ACX71117.1
1 683
Architecture
ATT
STR
RBD
ATT 4-310 | STR 311-476 | RBD 477-681 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ACX71117.1
1 683
Domain Start End Length (AA) Confidence
N-terminal 1 270 270 0,8430
Central domain 271 491 222 0,6566
C-terminal 492 683 191 0,8677
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-270
Central
271-491
C-terminal
492-683

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptomyces phage ZL12
[NCBI] 		2570911 Uroviricota > Caudoviricetes > Fuzanglongvirus >
Host Streptomyces sp. ZL12
[NCBI] 		683081 Actinomycetota > Actinomycetes > Kitasatosporales > Streptomycetaceae > Streptomyces >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ACX71117.1 [NCBI]
Genbank nucleotide accession
GQ919031 [NCBI]
CDS location
range 28201 -> 30252
strand -
CDS
GTGACGGGCAAGCTGATCGGCGGCATTCCGAAGCAGACCCGGCTCGAGATCGAGCTGGTCGACGTCACGGGCACCCGGGCGGTGGGGTACGCCGCCGGGGACGAGGCGGAGATCGTGCGCCCGGTGCCGGTGGCACCGCAGGAGGACGGCACCTGGTCCGCTGACCTGATCTCGAACGCCCTGATTCAGGCGGACGCCGGGGACACGGTGTGGCGTGTCCAGGAGGGGCGGGCGCTCGACGGGACTCCGGTGGTGACGTACATCGTGGTCCCGGAGACCGGCGGCCCGCACTGGGTGGGGGACTTGCGGGTTGATCTCGGGGACGCGCCCACGGGCGGCAGCACCATCGTGTACGTGCCGGGCCCGGCTGGGGACGACGGCCTGGACGGGATGTCGGCATACGAGGTGTGGCTGGAGGCCGGGAACACCGGCGCCGAGGCAGACTACCTGGCGTCGCTGGTCGGCCCGTCCGGTGCGGCGGAGGCCCAGGAGTACACGGACACCGCGGTCGCAGCGGAGGCCGCGCGCGCGGCCGAGGCGTATGACCCGGCCGGGGCTGCGGCGGGCGCCCAGTCGGCAGCTGTCACCGCGGCGGCCGCCGACGCCTCCTCGAAGGCGAGCGCAGCCCAGTCTGCCGCCGTGTCCGCAGCAGCAACGGCAGCTGCTGGGCTGTACCTTCCGAACGCTGTTCAGACCGTGGACGCCTACCTGGCCAGCGCTTCCCCGTCGTCTCCGAGGTTCTTCGGTCACCGCGGTGGCGGCATGGTCCGCCCCGAGCACACCCTGGTGGGCTACCGGGCGTGCGCGGCCATGGGGTTCGCTCTGGAGGTGTCTGTGAACGTGGACGCCAGCGGCGAGTTGTGGTGCTTGCACGACCTCACCCTGGACCGGACTACGTACCAGACTGGGAACCTGAACACGTACACCACGGAGGAGGTCGGCCAGGCCGTCCTCACCAACGGTCGCACCCTTCTCGGCCCGGGGTGGACCGACCAGCGGATGGTGCCGCTGCGGCAGGTCCTCGACGAGTTCCTCGGCAAGATTCCGATCCTGCTGGAGCCCAAGGGCAACGACGCCGTTGTCCCGTGCCAGACGCTCCTCGACACGTACTACCCGCACGCCCCGCGGTCGGTGATCTGGAAGGCCCACATTGGGACGCTCAGCCTGCCGTGGGCGAAGTCGCGCGGCTACCGCACCTGGGTGTACCTCGACCCCGGAACCACCGACGCCACCATGAACGCCAAGGACACCAACGTCGACTACTGGGGCGTCGCTACCACCTTCACCGACCAGCGAATCAGCGAAGTCGTCGCACGTGGCAAGCCGGTCTTTGCCTGGCCCGTTTACCGCAGGTCGCAGGTCGCGCGGCTGACTGGGCTGGGTGTGGTGGGCATGATGTCGTCCGACCCCCGGTACGTGTCCACCAGCACCCCGCAGCGCACGTTTAGCCGGTGGGGGCTCGCAGTGAAGGAGTCCGGCGGAACACCCACGCTGGACTACGACACCGCCTACGCCCTGGTGTTCGGGGAAGGTGCGGACGCCGGCTGGGTCAGCATCAACGCGTTGCCGAACCAGTCCTACGGGCTCGGCAACTACAGCCCGATTGTGGGGTCCGCGGCCGGCTACCGGATCGCGTTCGACATGAAGCACAAGGTGCTGCCCGCGGGCACGGTCCACGGCGGCTACTACTTCGGCAAGGCGTCGGACGACCCGTACCGGTTCACTACGGCCAACGCCACGGGCGGGTATCACGTGGTGATGCGGGCGTCCGGTGACATGCAGTTGTACCGGCACACGGCGGGGGTGACGTCCGGTACGCAGGTCGGCTCGACCATTGCGACCACGGTGCCCGTCGCGGACACGGCCATGTCGTTCCAGATCGACGTCACTCCAACAACGGTCGAGCTGCGCCGTACGGACGGGGTCGGGTGGACGACGGGGCCGATCGCGGACACCACGTACCGGGGCGGGTATCACGGGCTTTCGAATGGGTCGATCACGGATCTCGCGACGCGACCGTTCTGGCGGAACCTGGTGATCACGCAGTTGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
18698b20c2995f8303156d2e4036c67322061848701df972ca6f034786efff40
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7358
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of the replication, transfer, and plasmid/lytic phage cycle of the Streptomyces plasmid-phage pZL12 Zhong,L., Cheng,Q., Tian,X., Zhao,L. and Qin,Z. 2010 20472796 GenBank