Protein

View in Explore
Genbank accession
AIX29630.1 [GenBank]
Protein name
tail fiber
RBP type
TSP
Evidence DepoScope
Probability 0,99
TSP
Evidence RBPdetect
Probability 0,73
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence Phold
Probability 1,00
Protein sequence
MAFKINGVVRIDNSGNGFLGIVTATDANITGVLTATEVDAKVSSKAITEQTDGTVDDVTGADELLLLDAETGGLLRVSIDEFVQGSGIGTLVTDFDNLTVTGITTVATLKGIGSNNISVGSTLSFADGTEIIMGDSGDFSIHHDGDHTYLDETGQGNLKLRTNNFRVTNIAETKPAITAQVTSGVELYFDGNKKIETTNTGVLVSGMLTADRLRSGDIAARNVITLGITTIQDHLEVNDSTGSGTEYNLNVKTNGSSTFGVLGNGNILLGNSSGAPFIATNDHHATSKKYVDDAIDDSVSYIGASAWARTASSGTLISGMNFSVARQSNGVYNYTFTTPMSNADYSIVAQLSEAGTGTINGTVRTDNISTTGFKLVISNFADQSVDQGHSVVVHSATAIAPPSGVGADAWGTFSGTTGDLQAGMNISSTTRTALGEYDVEFITEMPSDSEYAVTAVSNASQAKFINIRNKSTSGFKVVTRDGSGNISDGAVSFAVHASSTVTPTYTWTRDGTTLKPANDGDMVEVSGISFGDRNIQGVSSIGLTSSGGFSTNSGHITFEASSGGAENNIYYKIKGANAIHQWEGSNGKTLARLNDSGAFTLGGTLASSPSISMNADGSSSFDGQLTIISDNRSGFSFVTNSVGGNNSYNVGQTATQASFYLVQAGNGLGVYLPKDGTAWSPVSSDEAVKDIVPMTVDNSWDVIRDVELFNYYYKVNDEQHRATHPPYFGPMAKRLGDQDPDLLIDNDDACTYNAGLLEMKALSALSTALNRIEALEAKVQSLEEGVTPD
Physico‐chemical
properties
protein length:789 AA
molecular weight: 82523,55840 Da
isoelectric point:4,50514
aromaticity:0,07098
hydropathy:-0,16882

Domains

Domains [InterPro]
IPR030392
684–779
IPR030392
Coil
765–785
Coil
AIX29630.1
1 789
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage ACG-2014f
[NCBI] 		1493511 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIX29630.1 [NCBI]
Genbank nucleotide accession
KJ019093.1 [NCBI]
CDS location
range 165664 -> 168033
strand +
CDS
ATGGCATTTAAGATTAATGGCGTAGTACGCATTGATAATAGTGGCAACGGTTTTCTGGGAATTGTAACCGCTACCGACGCTAATATCACAGGAGTTCTCACTGCCACTGAGGTGGATGCGAAAGTATCATCTAAGGCAATAACTGAACAAACAGATGGAACCGTAGATGATGTAACTGGTGCAGATGAACTATTACTATTAGATGCTGAGACTGGTGGATTACTAAGAGTATCAATAGATGAGTTCGTGCAGGGTTCAGGCATTGGAACTCTAGTAACGGACTTTGATAACTTAACTGTTACTGGTATCACAACCGTTGCCACCCTCAAAGGTATTGGATCTAATAACATCAGTGTAGGGAGCACACTTTCCTTTGCTGATGGTACAGAGATCATCATGGGTGACTCTGGTGACTTCAGTATTCATCATGATGGTGACCATACTTACCTAGATGAGACGGGGCAGGGTAATCTAAAACTCCGTACAAATAACTTTAGAGTAACAAATATAGCAGAAACAAAACCAGCTATCACAGCACAGGTTACTTCTGGTGTTGAGTTGTATTTTGATGGCAATAAGAAGATAGAAACTACAAATACTGGTGTTCTTGTGAGTGGTATGCTCACTGCTGATAGATTAAGATCAGGTGATATTGCTGCTAGAAATGTAATCACACTGGGTATTACCACTATCCAAGATCATTTGGAAGTGAATGATAGTACTGGTTCTGGTACCGAATATAATCTTAATGTTAAGACTAATGGTAGTTCTACCTTTGGTGTCTTAGGTAATGGAAATATTCTACTTGGAAACAGTTCCGGTGCTCCATTCATAGCGACGAATGATCACCACGCAACTTCCAAGAAGTATGTGGATGATGCTATTGATGATTCCGTCAGCTACATCGGCGCTAGTGCTTGGGCTAGGACCGCATCAAGCGGAACACTTATAAGTGGAATGAATTTTTCTGTTGCTCGGCAATCAAACGGAGTATACAATTACACCTTTACAACACCAATGTCAAATGCTGACTACAGCATAGTTGCCCAACTATCTGAAGCCGGCACGGGAACAATAAATGGTACTGTTAGAACTGACAATATTAGTACTACTGGATTTAAGCTAGTTATTTCTAATTTTGCCGATCAAAGTGTTGACCAAGGTCACAGTGTAGTCGTCCACAGTGCCACCGCCATCGCGCCGCCGTCAGGCGTAGGCGCTGACGCCTGGGGAACATTCTCTGGAACGACTGGCGACCTGCAAGCTGGGATGAATATCAGCTCAACTACACGTACTGCCCTAGGAGAATATGACGTAGAATTTATAACCGAGATGCCTTCGGACTCAGAATATGCCGTAACCGCAGTATCTAATGCAAGTCAAGCAAAGTTTATTAATATACGCAATAAGTCTACAAGTGGTTTTAAGGTTGTAACTAGAGATGGTTCTGGAAATATTTCTGACGGAGCCGTATCCTTTGCCGTCCACGCATCATCAACAGTCACGCCAACCTATACCTGGACACGCGACGGCACAACGCTCAAGCCTGCTAATGATGGTGACATGGTTGAAGTAAGTGGTATTAGCTTTGGCGATAGAAACATACAAGGTGTATCTAGTATTGGACTCACTAGCAGTGGAGGCTTCAGCACTAATAGTGGTCATATTACTTTTGAGGCATCAAGTGGTGGTGCTGAAAACAATATCTATTATAAAATCAAAGGTGCTAATGCTATCCATCAGTGGGAAGGTAGCAACGGTAAAACCCTTGCTCGCCTAAATGATTCGGGCGCTTTTACATTAGGTGGCACACTTGCATCATCGCCGAGCATCTCGATGAATGCGGACGGTTCTTCTTCTTTTGATGGTCAACTGACTATTATATCTGACAACAGAAGCGGTTTTTCTTTTGTAACTAATAGCGTTGGTGGAAACAATTCATACAACGTTGGGCAAACAGCGACTCAAGCATCGTTCTATTTAGTCCAAGCAGGCAATGGGCTAGGTGTTTATCTTCCTAAAGATGGTACAGCTTGGTCTCCGGTTAGCTCTGATGAAGCTGTTAAAGATATTGTTCCGATGACTGTTGATAACAGTTGGGATGTTATTCGAGATGTTGAGCTGTTTAATTACTACTACAAGGTTAATGATGAACAGCATCGAGCTACTCATCCGCCTTACTTTGGCCCAATGGCTAAAAGGCTCGGTGATCAAGACCCAGATTTGCTGATTGATAACGATGATGCTTGCACATATAACGCTGGGTTACTTGAGATGAAAGCATTGTCTGCTCTTTCAACAGCACTAAACCGCATCGAAGCATTAGAAGCGAAAGTCCAATCACTCGAAGAAGGTGTGACACCTGACTAA

Tertiary structure

PDB ID
155f70fe3a25c8fb85ecea9b0f254df8724e3324883b5d78a4455fe739548e19
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6580
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecological redundancy of diverse viral populations within a natural community Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B. 2015-03-20 — GenBank