Protein

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Genbank accession
QIG69987.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence Phold
Probability 1,00
Protein sequence
MAALSRVIKTGDGSTTQFVVDFALGYLSPSDITCRVGNEADGSGNPIYRTITFLSETLLQVGGTPAGNGVQVVFERTVEKEDTIVHFSTGDVLDENNLDLSFKQILMVVHEVLDGRFGAFDSDLDMGGFRITNLGDPVDNSDAATKFYVDDRTALGAEQVALATAAAEVASDAAIAAQAAQTAAAGSASAAATSATNAATSASNAATSASSAAASALSAQTLLSGGSAGQFLGKNSNTNFDYAWINLPGGGDMFKSMYDPQGKNADAFSWNNFTDKPTTFPTTVANISDLKSMAKRDLTISSAAPSGGVDGDVWYKI
Physico‐chemical
properties
protein length:317 AA
molecular weight: 32695,62190 Da
isoelectric point:4,30484
aromaticity:0,07886
hydropathy:-0,04416

Domains

Domains [InterPro]
IPR005604
5–115
IPR005604
QIG69987.1
1 317
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_Y48
[NCBI] 		2509782 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG69987.1 [NCBI]
Genbank nucleotide accession
MN988512.1 [NCBI]
CDS location
range 37797 -> 38750
strand +
CDS
ATGGCAGCACTTTCGCGGGTTATTAAGACCGGCGATGGCAGCACGACACAGTTCGTTGTTGACTTTGCGCTCGGCTATCTAAGCCCCTCGGACATCACTTGTCGCGTAGGCAACGAGGCTGACGGGTCTGGAAACCCAATTTACCGCACTATCACATTCCTGTCGGAAACACTGCTGCAAGTCGGTGGTACTCCTGCTGGTAATGGAGTGCAGGTAGTCTTTGAACGTACCGTCGAGAAAGAGGACACGATTGTTCACTTCTCTACTGGCGACGTTCTGGACGAGAATAACCTTGATCTGTCGTTCAAACAGATTTTGATGGTCGTGCATGAGGTTCTGGATGGGCGCTTTGGTGCGTTCGACAGTGACCTGGACATGGGTGGCTTCCGTATCACCAACTTGGGCGATCCGGTAGACAACAGTGATGCTGCGACCAAGTTCTATGTAGACGACCGTACTGCACTCGGCGCTGAACAGGTGGCTCTTGCTACTGCTGCGGCTGAGGTTGCCAGTGATGCGGCTATTGCTGCACAGGCTGCACAAACGGCTGCGGCGGGTTCCGCCTCGGCGGCTGCGACCAGTGCAACGAATGCAGCTACCAGCGCGAGCAATGCGGCGACATCTGCTTCTAGCGCAGCGGCCAGCGCCCTATCGGCGCAGACCTTGCTGTCCGGCGGCTCTGCTGGCCAGTTCCTCGGTAAGAACTCGAATACGAACTTCGACTACGCCTGGATTAACCTTCCGGGTGGCGGCGATATGTTCAAGTCGATGTACGACCCGCAAGGCAAGAACGCCGACGCGTTCTCGTGGAACAACTTCACAGACAAGCCAACGACGTTCCCTACGACAGTGGCGAACATCTCAGACCTCAAGTCTATGGCAAAGCGCGACCTCACGATTTCCAGTGCAGCCCCTTCGGGCGGCGTTGACGGAGACGTTTGGTACAAGATTTAA

Tertiary structure

PDB ID
3e58841f8739638ed8552a27b774497d22cfbfbed29b257d881f0a02b35f5c97
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7987
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank