Protein

View in Explore
Genbank accession
XAI70038.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAWYNDGTISVTNGSQVVTGVGTQFLSNIRNGAILMVGPKLRVINDIISDTELQLEVPFDGPTQNGIVYEIIRNWQDTSPTELARRIDNFLTDRQRTMDEFVTWVNGTYNGGAARDGKYPLTDRYGTVRLVKSPERMEYETGGTGGGGGGADLSGAGIFLASDYGVMGGLTIDETDNINAALNAVALKGGGKLIVRSHNGTDPIYLNGLVAIESNNVTLEFVSDVVYGSKGWMRISGGLAEIRRPGQIELLKLRLNSYANDDGYMVLPMRENNGSFLRVGDRITVRGENDRNGKVLEKQVTIVKQIVGDDVICADEPDYTFKPTYPDSEYPEDLTTGTTISISVYSAMTGNTKNTDVIPVVDSTGFFAGDLVYVSDSRTERDMMQTVPPANLLSAANMEICRIAAVEGNNLRLERAIRREYLTAWAGGVVKMDAIKNSHIKLRNVSWIGIQPDRKAHGAAINYGWACTVRVDDMQGRGGRKGIGVRVAYAYDCHVVDSKVYDAYSFLSAEGYGISLYYSTMCSIRNCNASGNRHNYLLQTVTSCDVFDNNSNDDYISGIDLHGAGSVDCRVMRNRVSRSKSYADGVTNGGAIRNGNTAHTIGDHRTVIADNYIEGYLDVKCAAIDVSPASKDVIIRNNDIVDCAVGFRHYRINSSILPAQHTNRVTVEYNNFTRVAAPFDVNNYANSIFDELIMIGNKSIENSTHFVVKNVAKVLAMENKIIRPVATAGSFAFEFNGCGNVKAYNNYAGEAARGMNIIACDYAKLVRNMLGDITEGVAVNDGGNNGTLINLQNTDALPSGGSGGAASPAKFTRIMGTLADKVTSTDPVNIDNNVPSIANGLTAVQGAVNVKIGSLIEVYAVAPYVSLGGATGPVTAHLWADGVRVASSVDRLTASTGAENTGGKDFVLVANFIATEEVLDLILKIGPNSNSNTIMLNSKFGGGSQPYILVKEFPQ
Physico‐chemical
properties
protein length:955 AA
molecular weight: 102899,49650 Da
isoelectric point:5,40530
aromaticity:0,07539
hydropathy:-0,16356

Domains

Domains [InterPro]
DC_1966
ATT
1–434
DC_1966 DC_1256
IPR011050
STR
176–694
IPR011050
XAI70038.1
1 955
Architecture
ATT
STR
RBD
ATT 1-434 | STR 435-694 | RBD 695-955
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAI70038.1
1 955
Domain Start End Length (AA) Confidence
N-terminal 1 173 173 0,9915
Central domain 174 802 630 0,9951
C-terminal 803 955 152 0,9950
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-173
Central
174-802
C-terminal
803-955

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Nican01
[NCBI] 		3138540 Uroviricota > Caudoviricetes > Nickievirus >
Host Pseudomonas syringae
[NCBI] 		317 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAI70038.1 [NCBI]
Genbank nucleotide accession
PP179318.1 [NCBI]
CDS location
range 23264 -> 26131
strand +
CDS
ATGGCCTGGTATAACGATGGAACCATCAGCGTGACGAACGGCAGCCAAGTCGTCACGGGTGTGGGTACTCAGTTCCTGAGCAACATCCGCAACGGGGCCATTCTCATGGTTGGCCCCAAGCTGCGGGTGATCAACGACATCATCAGCGACACCGAGCTTCAGCTCGAAGTGCCTTTTGATGGCCCGACTCAGAACGGTATCGTCTACGAAATCATCCGCAACTGGCAGGACACCAGCCCGACTGAGCTTGCACGCCGGATCGACAACTTCCTGACTGACCGCCAGCGCACGATGGACGAGTTCGTCACCTGGGTGAACGGAACGTACAACGGTGGCGCAGCGCGTGACGGTAAATACCCGCTGACTGACCGGTACGGGACTGTGCGCCTGGTGAAAAGCCCCGAGCGCATGGAGTATGAGACCGGTGGTACAGGTGGAGGCGGCGGTGGAGCTGATCTGTCTGGTGCCGGCATCTTCTTGGCCAGCGACTACGGCGTCATGGGTGGTCTGACCATCGACGAGACCGACAACATCAACGCCGCGCTCAACGCTGTAGCCCTCAAGGGTGGCGGCAAGCTGATCGTTCGCAGCCACAACGGCACCGACCCCATCTACCTCAACGGTCTGGTTGCCATCGAGTCGAACAACGTCACCCTGGAATTCGTGAGCGACGTGGTTTACGGCAGCAAGGGGTGGATGCGTATCTCTGGTGGTCTGGCCGAGATTCGTCGCCCGGGCCAGATTGAGCTGCTGAAGCTGCGCCTGAACTCCTACGCCAACGATGACGGCTACATGGTCTTGCCGATGCGCGAGAACAACGGTTCGTTCCTGCGAGTGGGCGACCGTATCACTGTGCGTGGTGAGAACGACCGAAACGGCAAGGTGCTTGAGAAGCAAGTGACCATCGTCAAGCAGATTGTTGGTGACGATGTGATCTGCGCCGATGAACCTGACTACACCTTCAAGCCGACCTACCCTGATTCGGAATACCCGGAAGACTTGACCACCGGTACGACTATCTCGATCAGCGTGTACTCGGCCATGACCGGCAACACCAAGAACACCGATGTGATCCCAGTAGTGGATAGCACCGGGTTCTTCGCCGGCGACTTGGTGTACGTGAGCGACAGCCGTACTGAGCGAGACATGATGCAGACCGTCCCGCCAGCCAACCTGCTTTCGGCCGCGAACATGGAAATCTGCCGCATCGCTGCGGTCGAGGGTAACAACCTGCGCCTGGAACGAGCGATCCGTCGTGAGTACCTGACTGCATGGGCCGGTGGTGTCGTGAAGATGGACGCCATCAAGAACAGCCACATCAAGCTGCGCAACGTCTCCTGGATCGGTATTCAGCCAGACCGCAAAGCACACGGCGCTGCGATCAACTACGGCTGGGCCTGCACCGTTCGAGTGGATGACATGCAGGGTCGTGGTGGGCGGAAGGGTATCGGTGTGCGTGTTGCCTACGCCTACGACTGCCACGTTGTCGACTCGAAGGTCTACGACGCCTACAGCTTTCTGTCGGCCGAGGGCTACGGGATCAGCCTCTACTACTCGACCATGTGCTCGATCCGTAACTGCAACGCTTCTGGCAACCGTCACAACTACCTGTTGCAGACCGTGACCAGTTGCGACGTGTTCGACAACAACTCCAACGACGACTACATCAGCGGCATCGACTTGCACGGTGCAGGTTCTGTTGACTGCCGGGTCATGCGCAACCGCGTAAGCCGGTCCAAGTCGTATGCGGATGGCGTTACCAACGGTGGTGCGATTCGTAACGGTAACACTGCGCACACCATCGGCGACCACCGGACTGTGATCGCGGACAACTACATCGAAGGCTACCTGGACGTGAAGTGCGCGGCGATCGACGTGTCCCCGGCCTCGAAAGACGTGATCATCCGCAACAACGACATCGTGGATTGCGCCGTAGGCTTCCGTCACTACCGGATCAACAGCTCGATCTTGCCTGCGCAGCACACCAACCGCGTGACGGTCGAGTACAACAACTTCACCCGAGTGGCTGCGCCGTTCGACGTGAACAACTACGCCAACTCGATCTTCGACGAGCTGATCATGATCGGCAACAAGTCCATCGAGAACAGCACCCACTTCGTCGTGAAGAACGTGGCCAAAGTTCTGGCGATGGAGAACAAGATCATTCGCCCGGTAGCGACCGCTGGGTCGTTTGCGTTCGAGTTCAACGGCTGTGGCAACGTCAAGGCGTACAACAACTACGCCGGCGAAGCAGCACGCGGGATGAACATCATCGCCTGTGACTACGCCAAGCTGGTCCGCAACATGCTGGGTGACATCACCGAAGGCGTAGCAGTCAACGATGGTGGCAACAACGGAACGCTGATCAACCTGCAAAACACCGATGCGCTGCCAAGTGGCGGTAGTGGTGGGGCTGCAAGCCCGGCCAAGTTCACTCGGATCATGGGCACCCTGGCTGACAAAGTGACCAGCACTGACCCGGTGAACATCGACAACAACGTGCCGAGCATCGCGAACGGTCTGACAGCGGTTCAGGGCGCTGTGAACGTGAAGATCGGGAGTTTGATCGAGGTCTACGCTGTCGCCCCGTATGTGAGCTTGGGCGGGGCTACAGGCCCAGTCACTGCGCATCTTTGGGCAGACGGTGTGCGTGTAGCTTCTTCGGTCGACCGACTGACCGCTTCGACTGGCGCAGAGAACACCGGCGGTAAAGACTTCGTGCTGGTGGCCAACTTCATCGCCACCGAAGAAGTGCTGGACTTGATCCTCAAGATCGGCCCGAACAGCAACAGCAACACCATCATGCTGAACAGCAAATTCGGCGGTGGCAGCCAACCCTACATTCTTGTGAAGGAGTTCCCGCAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e14dbbbac138269ac29361931cdad12953c9c7204af117966c5c8ad057538c80
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7343
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50