Protein

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Genbank accession
URY11360.1 [GenBank]
Protein name
tail connector protein
RBP type
TSP
Evidence RBPdetect
Probability 0,82
TF
Evidence RBPdetect2
Probability 0,87
Protein sequence
MADLKAGSTTGGAVIWHQGNFPLMPAGDDVLYKTFKLYSEYNKPQAADNDFVSKANGGTYAARVTFNNGVQIPYAINNTNQSGIFPGNGDNATYDMANIDIVSWYGIGFKSSQGSALRTVVINTRTGDISTKGGLYATGPVRSNATAPIAANDLTRKDYVDGRINIVTDNANSRVLRKGDTMTGTLTAPNFFSQNPASEANHVPRFDQIVIKDSVQDFGYY
Physico‐chemical
properties
protein length:221 AA
molecular weight: 23799,07770 Da
isoelectric point:6,72021
aromaticity:0,10407
hydropathy:-0,37964

Domains

Domains [InterPro]
DC_0466
STR
1–219
DC_0466
IPR005601
STR
56–195
IPR005601
URY11360.1
1 221
Architecture
STR
STR 1-219 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URY11360.1
1 221
Domain Start End Length (AA) Confidence
N-terminal 1 156 156 0,3128
Central domain 157 210 55 0,1293
C-terminal 211 221 10 0,6927
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-156
Central
157-210
C-terminal
211-221

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage ESh15
[NCBI] 		2950760 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shigella sp.
[NCBI] 		625 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URY11360.1 [NCBI]
Genbank nucleotide accession
ON528725 [NCBI]
CDS location
range 130735 -> 131400
strand +
CDS
ATGGCCGATTTAAAAGCTGGTAGTACAACTGGCGGTGCCGTTATATGGCATCAAGGTAATTTCCCTTTAATGCCAGCAGGTGATGACGTCCTGTATAAAACGTTTAAACTCTATTCAGAATATAATAAACCACAAGCTGCTGATAACGATTTCGTTTCTAAAGCTAATGGTGGTACGTATGCCGCTCGAGTAACATTTAATAACGGTGTGCAAATACCTTATGCCATAAATAACACAAATCAAAGTGGTATTTTCCCAGGCAACGGTGACAATGCAACATATGATATGGCAAACATCGATATTGTTTCATGGTATGGCATTGGATTTAAATCTTCTCAAGGTTCTGCATTACGTACTGTGGTTATTAACACTCGTACCGGTGATATCAGCACTAAGGGCGGTCTTTATGCAACTGGTCCTGTCCGTTCTAACGCTACTGCTCCTATAGCAGCAAATGACCTTACTCGTAAAGATTATGTTGATGGACGAATAAATATTGTTACGGATAACGCAAATTCCCGTGTATTGCGTAAAGGCGATACCATGACTGGTACTTTAACAGCACCAAACTTTTTCTCACAGAATCCGGCCTCCGAGGCTAATCATGTTCCTCGTTTCGACCAGATTGTAATTAAAGATTCTGTTCAAGATTTCGGCTATTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b43b9a4e309370507dcf3acba7a6eb7e6e1fd869560006819e3e65ed37083527
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7051
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Design of a bacteriophage cocktail active against Shigella species and testing of its therapeutic potential in Galleria mellonella Filippov,A.A., Su,W., Kevorkian,R.T., Sergueev,K.V., Srijan,A., He,Y., Lurchachaiwong,W., McGann,P.T., Ellison,D.W., Swierczewski,B.E. and Nikolich,M.P. — — GenBank