Protein

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Genbank accession
AOO02726.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 0,99
Protein sequence
MRKIESQMCAAVQSSSNWSLANTTVSFNEESGTSIVRLHGNKIAEIDDSSMTIFDGGWQSTTTKSRLNALIDTFCNGVTDGVFQKNYQWFIKDNNVIREFNNGYIFA
Physico‐chemical
properties
protein length:107 AA
molecular weight: 12014,21840 Da
isoelectric point:5,20562
aromaticity:0,11215
hydropathy:-0,34766

Domains

Domains [InterPro]
IPR057004
STR
1–107
IPR057004
AOO02726.1
1 107
Architecture
STR
STR 1-107
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AOO02726.1
1 107
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0007
Central domain 11 96 87 0,3148
C-terminal 97 107 10 0,7591
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-96
C-terminal
97-107

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-RIM2
[NCBI] 		687800 Uroviricota > Caudoviricetes > Pantevenvirales > Nerrivikvirus > Nerrivikvirus srim2
Host Synechococcus
[NCBI] 		1129 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AOO02726.1 [NCBI]
Genbank nucleotide accession
KX349250 [NCBI]
CDS location
range 46996 -> 47319
strand +
CDS
ATGCGTAAGATTGAATCTCAAATGTGTGCCGCTGTTCAGTCCTCCTCTAACTGGTCATTGGCAAACACGACAGTTTCATTTAACGAAGAATCTGGCACCTCTATTGTTCGTCTTCACGGTAACAAGATTGCTGAGATTGATGATTCTTCCATGACAATCTTTGATGGTGGTTGGCAGTCTACCACCACAAAATCACGCCTCAATGCACTCATCGACACATTCTGCAATGGTGTTACTGATGGTGTGTTCCAGAAAAACTATCAGTGGTTCATCAAAGATAACAACGTGATTCGTGAGTTTAACAACGGTTATATCTTTGCCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6cca3408aa6368555de925fcd00d736f81f604c0e3c22defc010b82ed521d90e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5034
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50