Protein

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Genbank accession
QGK89716.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MKIVSKNGVIYQNLIVSMIRDHTYSVKQLLTVVSDDRKLKFNDDFTFIDDLTQDELNAGLEAVKEILINANETELLKEYFSMFCKASSEDAKLKYAKEFKKDEIDNAKNNAIEGGVSYKDKIFQSAEKDRNLLTITVSLFAITKQLPEGFVWISKDNEAVPFTLEELIELGGIMANSVNANTIKARTLKDKVEQAKTLEEIEAIKWDNETLKKSKR
Physico‐chemical
properties
protein length:216 AA
molecular weight: 24596,83340 Da
isoelectric point:5,21045
aromaticity:0,07870
hydropathy:-0,39583

Domains

Domains [InterPro]
DC_1876
STR
1–156
DC_1876
IPR025484
STR
96–203
IPR025484
QGK89716.1
1 216
Architecture
STR
STR 1-203 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage DA10
[NCBI] 		2656519 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Campylobacter jejuni subsp. jejuni
[NCBI] 		32022 Bacteria > Proteobacteria > delta/epsilon subdivisions > Epsilonproteobacteria > Campylobacterales > Campylobacteraceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGK89716.1 [NCBI]
Genbank nucleotide accession
MN530981.1 [NCBI]
CDS location
range 34729 -> 35379
strand -
CDS
ATGAAAATAGTATCAAAAAATGGAGTAATTTACCAAAATTTAATAGTCTCTATGATAAGAGACCATACTTATAGCGTTAAACAACTTTTAACAGTTGTTAGTGATGATAGAAAGTTAAAGTTTAATGATGATTTTACTTTCATAGATGATTTAACTCAAGATGAGCTTAACGCAGGCTTAGAAGCAGTTAAAGAAATTCTTATTAATGCAAATGAAACTGAACTTTTAAAAGAATATTTTTCAATGTTTTGTAAAGCTTCAAGCGAAGACGCAAAGCTTAAATACGCTAAAGAATTTAAAAAAGATGAAATTGATAATGCTAAGAATAACGCTATTGAAGGCGGAGTATCTTATAAAGATAAAATCTTTCAAAGTGCTGAAAAAGATAGAAACTTACTTACAATCACAGTTAGTCTTTTTGCAATTACTAAACAACTTCCCGAAGGCTTTGTTTGGATTTCAAAAGATAATGAAGCAGTACCTTTTACTTTAGAGGAATTAATCGAGCTTGGCGGAATTATGGCAAATTCTGTTAATGCAAATACAATTAAAGCTAGAACTCTTAAAGATAAAGTTGAGCAAGCTAAAACTTTAGAGGAAATTGAAGCTATTAAATGGGATAATGAAACTTTAAAAAAATCTAAAAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1ba9ad156591c336d9381664f51069c3cb90de81f9bcb4bd5b2b6d38e2951224
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9351
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Campylobacter bacteriophage DA10 Hooton,S., D'Angelantonio,D., Connerton,P., Aprea,G. and Connerton,I. 2020-06-12 — GenBank