Protein

View in Explore
Genbank accession
XNS38190.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MALKTKIIVQQILNIDDTTTTASKYPKYTVVLGNSISSITAGELTAAVEAAAGSAAAAKDSEIAAKDSENKAKDSEIQAGIHADASEASATQSAASAAESEKQAKLSQGSAENSAASALESKNFKDASELAAQNAEQSKILAEQAQRAAEAAQSGAQASENKASAFATQAAASSASAGDFAAAAKQSELNAKTSETNAATSEVEAETQAETATTEANRAKAEADRAAQIVDSKLDKEDISGFIKVYKTKEEADADVSSRVLGEKILVWNQTDSKYGWYKVAGTAEAPVLELVETEQKLVSINNVHADDAGNVQITLPGGNPSLWLGEVTWFPYDKDSGVGYPGVLPADGREVLRVDYPDTWEAIEAGLIPSVTEEQWQAGATLYFSTGNGTTTFRLPDMMQGQAFRAAAKGEENAGNIKEQIPYITMINGKAPADDGTITLGNAADKNVWNGVDGEVLLRGAFGLGGAGLILNEPDAVSFFKAMRAFGSGYYRNDSESNPVIPKYSAGFYSKTADTHTFICSAYGNGVTFVATVNDALLDGENPTVHTNTLYGTANKPDLNTDTQGVLGIEKGGTGAINVDQARGALKVPTFMTVLEGGPEQSLVYSPDFTKALKVDNSTEWGLANVADGSPIPLSIKHGGTGAVNASQIRANLNIQGVKCVTSQIPSDFNALSSPDDNLNLLIANNGVWGVQSTKGDIKPLLLERGGTGATDQNGARHNLGLATNHSPVFAGIDLQGLNGTTSGIAVLRNRNAEGTQISYSRVYNEIQGSVAKTTIQTTREGGGTNYFQIDEYGLITNVRAIRCAPSNVGGEGFTVGVVPGGAFTAWRDRPAGMIVEHPSDDVAVNVLKSVRWGGDWVMGIDAARYGAGGCEAHLNVKGTTYTFNDVGYASAVQWVSTSDIRLKAQLKEILSAKEKVKALQGYTYFKRNNLNEDEYSFYSEEAGLIAQDVITVLPEAVYKVEETDYLSISYSGVTALLTNAMKEVMADAEAQEARISNLEAELAELKALVATLVNK
Physico‐chemical
properties
protein length:1017 AA
molecular weight: 107178,46920 Da
isoelectric point:4,72454
aromaticity:0,06785
hydropathy:-0,27168

Domains

Domains [InterPro]
DC_0608
ATT
2–955
DC_0608 Coil
Coil
Unmapped
142–162
Coil Coil IPR030392
IPR030392
CHP
900–997
IPR030392
DC_0227
RBD
937–1017
DC_0227
XNS38190.1
1 1017
Architecture
ATT
RBD
ATT 2-955 | RBD 956-1017
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNS38190.1
1 1017
Domain Start End Length (AA) Confidence
N-terminal 1 476 476 0,9216
Central domain 477 675 200 0,1703
C-terminal 676 1017 341 0,7703
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-476
Central
477-675
C-terminal
676-1017

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage SpoonbillGilly
[NCBI] 		3233710 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNS38190.1 [NCBI]
Genbank nucleotide accession
PP925828.1 [NCBI]
CDS location
range 86355 -> 89408
strand -
CDS
ATGGCACTTAAAACTAAAATTATTGTACAGCAGATTCTGAACATAGATGACACTACAACTACTGCTAGTAAGTATCCTAAATATACAGTAGTTTTAGGTAATTCTATTAGTTCTATTACTGCTGGTGAACTAACAGCGGCTGTTGAGGCCGCTGCAGGATCCGCTGCTGCTGCTAAAGACTCTGAAATAGCAGCTAAAGATTCTGAGAATAAAGCTAAAGATTCAGAAATTCAAGCAGGTATTCATGCTGATGCTTCTGAGGCTTCAGCAACCCAGTCTGCTGCTTCTGCTGCTGAATCTGAAAAACAAGCTAAATTATCTCAGGGTAGTGCAGAAAACTCTGCGGCTTCTGCTTTAGAATCTAAGAATTTTAAAGATGCTTCGGAACTTGCTGCTCAAAATGCAGAGCAGAGTAAGATTTTAGCAGAGCAAGCTCAAAGAGCTGCAGAAGCTGCCCAGTCTGGTGCTCAAGCTTCTGAAAATAAAGCATCAGCATTTGCTACACAAGCTGCTGCATCTTCAGCCTCCGCAGGAGATTTTGCTGCAGCCGCTAAACAATCTGAATTAAATGCTAAAACTTCTGAAACCAATGCCGCGACATCAGAAGTGGAAGCGGAAACCCAAGCTGAAACTGCTACTACTGAGGCAAATCGTGCTAAGGCTGAAGCCGATCGCGCAGCCCAGATTGTAGATAGTAAGTTGGATAAAGAAGATATATCTGGATTTATCAAAGTCTACAAGACTAAAGAAGAAGCGGACGCTGACGTTAGTAGTCGCGTACTAGGTGAAAAGATCCTAGTGTGGAACCAAACTGATTCAAAATATGGGTGGTATAAAGTAGCTGGTACTGCGGAAGCTCCAGTTCTAGAGTTAGTAGAAACAGAGCAGAAGCTAGTTTCTATTAACAACGTTCATGCAGATGATGCAGGTAACGTACAGATTACTCTTCCTGGTGGTAACCCTTCTTTATGGCTGGGTGAAGTTACTTGGTTCCCTTATGATAAAGATTCAGGTGTTGGTTATCCTGGTGTTCTTCCTGCTGATGGTCGTGAAGTTCTTCGTGTAGACTATCCAGATACTTGGGAAGCTATTGAGGCTGGCTTAATCCCTTCTGTTACTGAAGAACAATGGCAAGCTGGTGCAACTCTCTATTTCTCCACTGGTAATGGTACTACTACTTTCCGTCTACCTGATATGATGCAGGGGCAGGCATTCCGTGCTGCTGCAAAAGGCGAGGAAAACGCTGGCAATATTAAAGAGCAAATTCCGTACATTACTATGATTAACGGTAAAGCTCCTGCTGATGATGGTACAATTACTTTAGGTAATGCTGCGGATAAAAACGTATGGAATGGTGTTGACGGCGAGGTATTACTAAGAGGTGCTTTTGGTCTTGGTGGTGCTGGTTTAATTCTTAATGAACCTGATGCTGTTTCCTTCTTTAAAGCAATGCGTGCTTTTGGTTCCGGGTACTATAGAAATGACTCTGAGAGTAATCCAGTGATTCCTAAGTATTCCGCAGGATTCTACTCCAAAACTGCTGACACCCATACCTTTATCTGTTCTGCTTATGGTAATGGTGTTACTTTTGTAGCTACTGTAAATGATGCACTATTAGATGGGGAAAATCCTACTGTACATACGAATACCCTTTATGGTACAGCTAATAAACCAGATCTGAATACCGATACTCAAGGAGTTTTAGGAATAGAGAAAGGAGGTACTGGCGCAATTAATGTAGATCAGGCCAGGGGTGCTTTAAAAGTACCTACCTTTATGACAGTCCTAGAAGGTGGTCCAGAACAGAGTTTAGTATACTCTCCAGACTTTACCAAAGCTCTTAAAGTAGATAATTCTACTGAATGGGGTCTTGCTAACGTTGCTGATGGTTCGCCTATACCTTTATCTATTAAACATGGTGGTACTGGTGCAGTTAATGCCTCCCAGATAAGAGCAAATCTTAACATACAGGGTGTAAAGTGTGTAACAAGTCAGATACCCAGCGATTTTAATGCCTTATCCTCACCAGATGATAACTTAAACTTATTAATAGCTAACAATGGGGTATGGGGTGTACAATCAACAAAAGGTGATATAAAACCCCTACTATTGGAGCGTGGTGGCACTGGAGCAACAGACCAGAATGGGGCTAGACATAATTTAGGCTTAGCGACAAATCACTCTCCTGTGTTCGCTGGTATTGATCTGCAAGGTCTTAATGGAACAACTTCCGGTATAGCTGTATTGAGAAACAGAAATGCAGAAGGAACTCAAATCTCGTACTCTCGAGTTTATAACGAGATTCAGGGAAGTGTTGCAAAAACAACAATTCAGACGACAAGAGAAGGTGGCGGAACTAATTATTTCCAGATTGATGAATATGGGCTTATTACTAATGTTAGAGCAATAAGATGCGCGCCGTCAAATGTTGGTGGGGAGGGTTTTACAGTTGGCGTTGTTCCTGGTGGGGCGTTTACAGCTTGGAGAGATCGCCCTGCTGGAATGATTGTAGAGCATCCTAGTGATGATGTTGCGGTTAACGTCTTGAAATCTGTCCGTTGGGGCGGAGATTGGGTTATGGGTATTGACGCTGCTAGGTATGGCGCTGGAGGTTGCGAAGCTCATTTAAATGTAAAAGGAACTACATATACATTTAATGATGTTGGTTATGCTTCTGCTGTTCAATGGGTTAGTACATCTGATATTCGCCTTAAGGCTCAATTAAAAGAAATACTATCCGCTAAAGAAAAAGTCAAAGCTCTTCAAGGCTATACGTACTTCAAACGAAATAATTTAAATGAGGACGAGTATTCCTTTTACTCGGAAGAAGCTGGTCTTATTGCTCAGGACGTCATAACTGTTCTACCAGAGGCTGTTTATAAGGTAGAGGAAACAGATTATCTTTCAATTAGCTATTCTGGTGTAACCGCATTGCTTACCAATGCAATGAAGGAGGTAATGGCAGATGCAGAGGCCCAGGAAGCTCGTATCAGTAACCTAGAGGCAGAACTGGCAGAGTTAAAAGCTCTAGTAGCCACTCTGGTAAATAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
06268b359a6749ceeea94e008f839104727d609fa9b4ba9a9ebf9f378281a525
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5940
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50