Protein

View in Explore
Genbank accession
WBF78471.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAKVGGSYDSVVLGVSQQTPQDRRSGQMWEQVNMVSDPVQGLTRRQGSIFQAKQDLKAGTINTTLLKNAAVKFKIRPFSIKGVDYDLIYSNEYVREGASEILPVYCYDKTNKKFLKVQGGGPVWGAVANSGATAVVNIGEYLFISANGYIPQYSTTTKYAADNDRKSIAIWVRNGDYSRDYQFRFTTTAGTTYLAAVKTPSSSYPGKLDTSGIPVPVVNTPPASDQDFSNKLNKALADFNSAMAAYNKKIADSTNAYNSAVTQWLGTSSAAIQPEAIAISLTEQIRSLANLTSAQVQRDGSYIFITEGANIRTGECVSVADTYLKAVVNDVSKTEDLIPKHFYGKVVKVRSQKATGKDAYYLVAEAKDGMTGIYGDVIWRETAGIQTTPTSVFCVGTVVGDTLFIGSDPAALESLAGITGVPRFVGSQVGDQISMPVPNFLKKGITYMGVFQDRLLIGTGSTVFASRPGDYFNWFRQSVLSISDNDPVEMYALGSEDDTIYWDTTFDRNHVMFGRKYQYIISGRSLLTPNNPNIQIMSAVEDAVQAEPQASGNLVFYGKDIVRKGSLHQMQVGATTDSAESYECSQQLDRYIKGKPCQILCNQSPYVVLLRTTEQYNGFYVYTYLDSMQGGQRMFDSWSTWTWDEALGYCTGISKYQGEILCYTLRTNPTWTGMVCDRFTFDTELSDYPYLDSWRPMKNWVANKQDLLPQYFQRKLSVAYTSGHNNYFMGSPYENLDNNMPGWESDVNSLNIGVNYPAYFTPTSPYLRDKNDKAILNGRLTISRVNVAVSDTGALDGEVDLGDRVIELPGFSGRILTRLGNFVGRQPIVETSVIMPVYKEIREYKLKLMARDWLPLTVTGLEWVGQWFSRVRRV
Physico‐chemical
properties
protein length:874 AA
molecular weight: 97140,46950 Da
isoelectric point:6,53082
aromaticity:0,11327
hydropathy:-0,28627

Domains

Domains [InterPro]
IPR058003
TTP
1–874
IPR058003
DC_0058
STR
1–874
DC_0058
WBF78471.1
1 874
Architecture
STR
STR 1-874
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WBF78471.1
1 874
Domain Start End Length (AA) Confidence
N-terminal 1 159 159 0,8713
Central domain 160 358 200 0,4105
C-terminal 359 874 515 0,2102
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-159
Central
160-358
C-terminal
359-874

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage EspYZU13
[NCBI] 		3003790 Uroviricota > Caudoviricetes > Autographivirales > Melnykvirinae > Cronosvirus
Host Cronobacter sakazakii
[NCBI] 		28141 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBF78471.1 [NCBI]
Genbank nucleotide accession
OP819285 [NCBI]
CDS location
range 38498 -> 41122
strand +
CDS
ATGGCTAAAGTTGGCGGAAGCTACGACTCAGTTGTGCTTGGCGTAAGCCAGCAGACCCCGCAAGACCGCCGCTCTGGTCAGATGTGGGAACAAGTCAACATGGTGTCTGACCCGGTACAGGGCTTGACTCGTCGCCAGGGTTCAATCTTCCAGGCGAAGCAAGACCTCAAGGCAGGCACCATCAACACGACCCTGCTAAAGAACGCAGCGGTTAAGTTCAAGATTCGACCATTCTCTATCAAGGGAGTGGATTACGACTTGATTTATTCAAACGAATATGTTCGTGAGGGTGCGTCGGAGATTCTCCCGGTGTACTGCTACGACAAGACGAACAAGAAGTTCCTGAAGGTTCAAGGCGGTGGCCCGGTGTGGGGTGCGGTGGCGAACAGTGGGGCGACGGCGGTGGTCAACATCGGCGAGTACCTGTTCATTTCCGCGAATGGTTACATCCCCCAATACTCCACCACCACAAAATACGCGGCAGATAATGACCGTAAGTCAATCGCTATCTGGGTTCGTAATGGCGACTACAGCCGTGACTACCAGTTCCGATTCACCACTACGGCAGGTACGACCTACCTGGCAGCGGTAAAGACTCCTAGCAGCTCCTACCCTGGTAAGCTGGATACTTCCGGTATTCCAGTTCCCGTGGTAAACACACCACCTGCAAGTGACCAGGATTTCTCCAATAAGTTAAACAAGGCGCTGGCTGACTTTAACTCCGCAATGGCAGCTTACAACAAGAAGATTGCCGACTCAACGAACGCTTATAACTCAGCAGTAACGCAGTGGCTCGGTACATCATCTGCGGCAATTCAGCCAGAAGCAATCGCTATTTCACTGACTGAGCAAATTCGCTCGTTGGCTAATTTAACCTCGGCACAGGTGCAGCGTGACGGCTCTTACATTTTCATCACCGAAGGGGCTAACATCCGAACTGGTGAATGTGTGTCCGTAGCTGACACGTACCTCAAGGCCGTGGTTAACGACGTGAGCAAGACTGAAGACCTCATTCCGAAGCACTTCTACGGGAAGGTGGTTAAGGTGCGCTCGCAGAAGGCCACTGGTAAGGATGCTTACTATCTGGTGGCGGAAGCTAAAGATGGTATGACTGGCATTTATGGCGACGTTATCTGGCGCGAGACAGCAGGTATCCAGACTACACCAACCAGCGTGTTCTGCGTCGGTACGGTAGTCGGTGACACGCTGTTCATCGGCAGTGACCCTGCCGCGCTGGAATCACTGGCAGGTATCACTGGTGTTCCTCGCTTCGTGGGTAGTCAGGTAGGTGACCAGATTTCAATGCCTGTACCTAACTTCCTGAAGAAGGGCATCACCTACATGGGTGTGTTCCAGGACAGGCTGCTTATCGGCACAGGCTCTACGGTGTTCGCCAGCCGACCCGGTGACTACTTCAACTGGTTCCGTCAGTCGGTGCTCAGCATTTCTGATAATGACCCGGTGGAAATGTACGCCCTGGGTTCAGAAGACGATACGATTTATTGGGACACAACGTTCGACCGTAACCACGTTATGTTCGGACGCAAGTACCAGTACATTATCAGTGGTCGCTCGCTGCTTACTCCGAACAACCCCAACATCCAGATTATGTCTGCGGTGGAGGATGCTGTTCAGGCAGAGCCGCAGGCCTCTGGTAACCTCGTCTTCTACGGCAAGGATATCGTGCGCAAGGGTTCACTGCACCAGATGCAGGTGGGCGCTACGACGGACTCTGCGGAATCGTATGAGTGCTCGCAGCAGCTCGACCGCTACATCAAAGGTAAGCCGTGTCAAATCCTCTGTAACCAGTCACCTTACGTCGTGCTCCTCCGCACCACTGAGCAGTATAACGGATTCTACGTTTACACCTACCTGGATTCAATGCAGGGCGGTCAGCGTATGTTCGATAGCTGGTCAACGTGGACGTGGGACGAGGCTCTGGGTTACTGTACGGGGATTTCCAAGTACCAGGGTGAGATTCTCTGCTACACGCTACGAACTAACCCGACCTGGACAGGCATGGTATGTGACCGCTTTACCTTCGACACGGAGCTGAGCGATTACCCGTACCTGGACTCGTGGCGGCCAATGAAGAATTGGGTTGCGAACAAGCAAGACCTGCTTCCGCAGTATTTCCAGCGTAAGTTGAGCGTGGCGTATACGTCAGGACACAACAACTACTTCATGGGTTCGCCCTATGAGAACCTGGACAATAACATGCCAGGGTGGGAGAGCGACGTTAACAGCCTGAACATCGGGGTTAACTACCCGGCGTACTTCACGCCAACGTCGCCGTACTTGCGGGATAAGAACGACAAGGCAATCCTGAATGGCCGCCTGACTATCAGCCGCGTCAACGTGGCGGTTAGCGACACGGGTGCACTCGACGGTGAGGTTGACCTAGGCGACCGGGTAATCGAACTCCCTGGGTTTAGTGGTCGAATCCTGACACGCCTGGGTAACTTCGTCGGGCGGCAGCCTATCGTTGAAACCTCAGTAATCATGCCTGTTTACAAGGAGATTCGGGAATATAAACTTAAATTGATGGCAAGAGACTGGCTCCCGCTGACCGTAACAGGTCTGGAATGGGTAGGCCAGTGGTTCAGCCGAGTACGGAGGGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fb7a432247dec11813effd731fbcf19a97526d40a1cfc53387d01b4e974ec1b9
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2941
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50