Protein

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Genbank accession
UVD41340.1 [GenBank]
Protein name
portal protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTLLVQPSFSAGEMAPATYGRVDLARYYTGLRTCRNFQVLPEGGVQNRSGTKFIAEVKGSANFTRLIPFQYSTEQTYILEFGNLYIRFVSNGGQVVSGSVPYEIASPYTTADLRDLKFTQSADVLTIVHPNYAPRELKRLAPTNWTLTTIAFQPGIAAPTGLSGSPRTGGSGDTTNYRYRVTAVSSKDTGSIESWASNTVTVASFDDKPGATLSWTAVAGADHYNVYKDKSSGVFGYIGQSDTTSFSDINIAPDNDKTVPIGYNPFTGGNNPSVVGYFQQRLVFAASKDQPQTIWMSRAGDFHNFGYSDPYKDDDGIEFTIASREVNQIRHLVSLRDLLVLTSGAEWSVSSSKETGITPESISVSAQSYFGSSGVIPAVYANTALYIQARGGKLSTLAYNDIDAGFRPSDVSVLSSHLLRGYTIEDQAFTLTPNGVLWMVRNDGVLLGFTFMPEQQVFAWHRHDTDGEVESVATVPEGDEDILYMIVKRTINGSTKRYIERMQSRQLTKFESGDYVYDRSFFVDCGLTYDGRGTMSATLTGGTDWKYPNPLTLEALSAPFNPGHVGRYLILYGGGDEDNIGDVLTVKILSYDSPGVVSVEPQTIVPESLRGISATRWGFAATTISGLGHLEGKTVSILADGNVAPQAVVSGGSITLDGPSLVVHVGLPITAEIETLDITMQNQQAFLGNKKRINQLVVLLEQSRGFWAGARSDRLRAASGWEYKQRATENYGEPIELKTGKAEISISTDWTDDGRIFIRQSDPLPITILGVLPNVQAGG
Physico‐chemical
properties
protein length:779 AA
molecular weight: 84702,69440 Da
isoelectric point:5,19101
aromaticity:0,10013
hydropathy:-0,21014

Domains

Domains [InterPro]
DC_0058
STR
1–774
DC_0058
IPR013783
STR
192–260
IPR013783
UVD41340.1
1 779
Architecture
STR
STR 1-774 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UVD41340.1
1 779
Domain Start End Length (AA) Confidence
N-terminal 1 523 523 0,9500
Central domain 524 722 200 0,4334
C-terminal 723 779 56 0,0581
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-523
Central
524-722
C-terminal
723-779

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_Pae_HB2107-3I
[NCBI] 		2961987 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa PA14
[NCBI] 		652611 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UVD41340.1 [NCBI]
Genbank nucleotide accession
ON778006 [NCBI]
CDS location
range 17912 -> 20251
strand -
CDS
ATGACCCTGCTCGTTCAGCCGTCTTTCAGCGCGGGCGAGATGGCGCCTGCAACCTATGGCCGTGTTGACCTGGCGCGCTACTACACCGGTCTGCGCACCTGTCGAAATTTCCAGGTTCTTCCCGAGGGGGGAGTCCAGAATCGGTCGGGCACGAAGTTCATCGCTGAGGTAAAGGGCAGCGCGAATTTCACTCGCCTAATCCCCTTCCAGTACTCGACCGAGCAGACCTATATCCTGGAATTCGGCAATCTGTATATCCGCTTCGTGAGCAATGGCGGACAGGTTGTCAGTGGTTCGGTCCCGTATGAAATCGCAAGCCCGTACACGACTGCCGATCTGCGCGATCTGAAGTTCACTCAGTCTGCAGATGTCCTGACCATCGTTCACCCGAACTATGCCCCCCGTGAACTGAAGCGTCTTGCGCCGACCAACTGGACTTTGACAACTATCGCGTTCCAGCCTGGCATAGCTGCGCCAACTGGTCTTTCTGGCTCTCCGCGGACTGGTGGTTCTGGAGACACAACGAACTATAGGTATCGGGTTACGGCAGTCAGTTCGAAGGACACCGGTTCTATCGAGTCCTGGGCGAGCAATACCGTCACTGTGGCCAGCTTTGACGATAAGCCTGGTGCCACCCTGTCCTGGACAGCCGTAGCAGGTGCTGACCACTACAACGTCTACAAGGACAAGTCCTCTGGCGTTTTCGGCTACATCGGTCAGTCTGACACCACGTCGTTCAGCGACATCAACATCGCTCCTGACAACGACAAGACTGTGCCGATTGGATACAACCCGTTCACTGGTGGCAACAACCCATCGGTCGTAGGCTACTTCCAGCAGCGGCTAGTCTTCGCAGCCAGCAAGGACCAGCCTCAAACCATCTGGATGAGCAGGGCTGGAGACTTCCACAACTTCGGCTATTCAGATCCATACAAGGACGATGATGGCATCGAGTTCACGATTGCCAGTCGTGAGGTAAACCAGATTCGTCACCTCGTATCGCTGCGTGATCTTCTGGTGCTGACCTCTGGCGCAGAGTGGTCGGTTAGTTCCTCGAAAGAAACCGGTATCACCCCTGAGTCGATCTCTGTCAGCGCGCAAAGCTACTTTGGGTCTAGTGGCGTGATTCCAGCTGTCTACGCCAATACTGCGCTGTACATCCAGGCCAGGGGCGGCAAGCTTTCGACGCTCGCCTATAACGATATTGATGCCGGCTTCAGGCCAAGCGACGTGAGCGTTCTTTCATCGCACCTACTGCGCGGGTACACCATCGAGGACCAAGCATTCACGCTGACGCCCAATGGCGTTCTGTGGATGGTCCGTAACGATGGTGTATTGCTCGGATTCACGTTCATGCCAGAGCAGCAGGTTTTCGCCTGGCATCGTCACGACACCGATGGCGAGGTCGAATCCGTAGCGACTGTTCCAGAGGGCGACGAAGATATCCTCTACATGATCGTCAAGCGCACGATCAACGGGTCTACCAAGCGTTACATCGAGCGCATGCAGTCACGCCAGTTGACCAAGTTCGAAAGCGGCGATTACGTCTATGACCGCTCGTTCTTCGTCGACTGCGGCCTGACTTACGACGGGCGCGGCACCATGAGCGCTACGTTAACTGGTGGGACTGACTGGAAATACCCGAACCCTCTGACCCTTGAGGCTCTATCGGCTCCGTTCAACCCCGGGCATGTCGGTCGCTATCTAATTCTCTATGGCGGTGGAGACGAGGACAATATCGGCGATGTGCTGACCGTCAAGATTCTCTCCTATGACTCCCCTGGCGTCGTTTCCGTGGAACCTCAGACTATCGTTCCTGAGTCATTGCGCGGGATATCGGCAACGCGCTGGGGCTTCGCCGCAACCACCATCAGTGGGCTTGGCCATCTTGAGGGCAAGACGGTTTCGATTCTCGCAGACGGAAACGTCGCGCCTCAGGCGGTTGTCTCTGGGGGTTCAATCACGCTGGATGGTCCTTCACTTGTTGTGCATGTCGGCCTCCCGATCACTGCGGAGATAGAGACGCTAGATATCACCATGCAGAACCAGCAGGCGTTTCTCGGCAACAAGAAGCGCATCAACCAGCTTGTCGTGCTGCTCGAGCAAAGTCGTGGCTTCTGGGCGGGCGCTCGGAGTGATCGTTTGAGGGCTGCATCCGGCTGGGAATACAAGCAGCGTGCGACAGAGAACTACGGCGAGCCTATCGAACTGAAGACAGGCAAGGCGGAGATCAGTATCAGCACAGACTGGACGGACGATGGCCGCATCTTCATCCGCCAAAGTGACCCGCTGCCCATTACGATCTTGGGAGTTCTTCCGAATGTCCAGGCCGGGGGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f4e17c76a8998725405ceb4bae387b2b2844f10c4d06e2db0a786c835473c194
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2860
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50