Protein

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Genbank accession
YP_009821372.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALVSQSIKNLKGGISQQPEILRYPEQGSLQVNGWSSETEGLQKRPPMVFIKSLGGRGYLGEDPYIHLINRDEYEQYYAVFTGNDVRVFDLSGYEYQVRGDRSYVTVNNPKDNLRMVTVADYTFIVNRTRQVRESQNLTDGGTFRDNVDALINVRGGQYGRKLEVNINGVWVSHQLPPGDNAKEDPPKVDAQAIAEALATLLRTAHPTWTFNVGTGFIHCIAPADTTLDIFETKDGYADQLINPVTHYVQSFSKLPLNAPDGYMVKIVGDTSKTADQYYVKYDKSQKVWKETVGWNISIGLDYTTMPWTLVRAADGNFDLGYHDWKDRRAGDEDTNPQPSFVNSTITDVFFFRNRLGFISGENIVMSRTSKYFEFYPPSVANYTDDDPLDVAVSHNRVSVLKYAVSFAEELLLWSDEAQFVLSANGVLSTKTAQLDLTTQFDVSDRARPYGIGRNIYYASPRSSFTSIMRYYAVQDVSSVKNAEDMTAHVPNYIPNGVYSINGSGTENFACVLTKGAPSKVFIYKFLYMDENIRQQSWSHWDFGDGVEVMAANCINSTMYMLMRNAYNVWIAAVDFKKNSTDFPFEPYRFHVDAKRSYHISETAYDIETNQTVVNVKDIYGASFSKGTMAICESDGKITEYEPTGSSWDSTPDIRISGDISGKDIVIGFLYDFQYVFSRFLIKQEQNDGTTSTMDSGRLQLRRAWVNYQDTGAFTVSVDNGNREFNYLVNARVGSTGLRLDQKATTTGQYRFPVTGNALYQKVSLSSFNASPVSIIGCGWEGNYTNRASGI
Physico‐chemical
properties
protein length:791 AA
molecular weight: 88965,16890 Da
isoelectric point:5,31441
aromaticity:0,12389
hydropathy:-0,40607

Domains

Domains [InterPro]
IPR058003
TTP
1–791
IPR058003
YP_009821372.1
1 791
Architecture
TTP
TTP 1-791
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009821372.1
1 791
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,9942
Central domain 141 345 206 0,1843
C-terminal 346 791 445 0,1947
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-345
C-terminal
346-791

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Pharr
[NCBI] 		2562178 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009821372.1 [NCBI]
Genbank nucleotide accession
NC_048175 [NCBI]
CDS location
range 23260 -> 25635
strand +
CDS
ATGGCTCTCGTATCACAATCAATCAAGAACCTCAAGGGAGGCATTAGCCAGCAGCCTGAAATCCTACGGTACCCAGAGCAGGGTTCGCTTCAGGTCAACGGTTGGTCCTCCGAGACTGAGGGTCTCCAGAAGCGACCACCTATGGTGTTCATCAAGTCCTTGGGAGGCCGTGGGTATCTTGGGGAAGACCCCTACATCCACCTCATCAACCGTGACGAATACGAGCAGTATTACGCTGTGTTCACAGGGAATGACGTTCGGGTATTCGACCTGTCCGGCTATGAGTATCAGGTCCGAGGTGACCGCTCTTATGTGACCGTCAACAATCCTAAGGATAACTTGCGGATGGTCACCGTGGCCGACTACACGTTCATCGTGAATCGCACCAGACAGGTCCGGGAGAGTCAGAACCTGACCGACGGTGGCACCTTCAGAGATAACGTGGACGCCCTCATTAACGTTCGCGGTGGGCAGTATGGTCGTAAGCTCGAAGTGAACATTAACGGCGTGTGGGTTAGCCACCAGCTCCCTCCGGGCGATAACGCTAAGGAAGACCCACCAAAGGTAGACGCACAGGCTATCGCTGAGGCCCTAGCGACCCTTCTCAGAACGGCACACCCTACGTGGACGTTCAACGTGGGAACAGGGTTCATTCATTGCATAGCTCCGGCAGACACCACACTTGACATATTCGAGACAAAGGATGGGTATGCGGACCAGCTAATCAATCCGGTAACCCATTACGTCCAGAGCTTCTCTAAGTTGCCTCTGAACGCGCCAGATGGGTACATGGTGAAGATTGTCGGAGATACGTCAAAGACCGCCGACCAGTATTACGTTAAGTACGACAAGAGTCAGAAGGTCTGGAAGGAAACTGTTGGATGGAACATCTCGATAGGGCTGGATTACACCACCATGCCTTGGACACTGGTTCGCGCAGCTGACGGTAACTTCGACCTCGGGTATCACGATTGGAAGGACCGACGTGCTGGTGACGAGGATACCAACCCTCAGCCATCCTTTGTGAACTCGACGATAACTGACGTGTTCTTCTTCAGGAACCGCTTAGGGTTCATCTCTGGGGAGAACATTGTGATGTCCCGTACCAGCAAATACTTCGAGTTCTACCCGCCGTCAGTGGCCAACTACACGGACGATGACCCACTGGATGTTGCCGTGAGCCATAACCGAGTGTCTGTCCTGAAGTACGCTGTGAGCTTCGCTGAGGAGCTTCTACTGTGGTCTGATGAGGCACAGTTCGTCCTGTCGGCCAACGGTGTGTTATCCACTAAGACCGCACAGCTGGACCTGACCACCCAGTTCGACGTGTCAGACCGCGCCCGTCCTTATGGTATCGGCAGGAACATCTACTATGCGTCTCCTCGCAGCTCCTTTACGTCCATCATGCGCTACTACGCGGTACAGGATGTAAGCTCTGTGAAGAACGCAGAGGACATGACGGCTCACGTACCGAACTACATTCCGAACGGTGTGTATAGCATCAACGGGTCTGGTACGGAGAACTTCGCGTGTGTACTGACCAAGGGCGCTCCCAGCAAGGTGTTCATCTACAAGTTCCTCTACATGGATGAGAACATCCGGCAGCAGTCGTGGTCCCACTGGGACTTCGGGGACGGTGTTGAGGTTATGGCCGCAAACTGTATCAACTCGACGATGTACATGCTGATGCGTAATGCCTACAACGTGTGGATAGCTGCGGTGGACTTTAAGAAGAACTCTACGGACTTTCCGTTCGAGCCTTACAGGTTCCACGTGGATGCCAAGCGGTCATACCACATCTCAGAGACTGCGTACGACATTGAGACGAACCAGACGGTAGTGAACGTCAAGGACATCTACGGTGCGTCGTTCTCTAAGGGTACCATGGCAATCTGCGAGAGTGACGGTAAAATCACCGAGTACGAGCCTACGGGTTCCTCTTGGGATTCAACACCGGACATCCGCATTAGCGGCGACATCTCAGGTAAGGACATTGTCATCGGGTTCCTGTACGACTTCCAGTATGTGTTCAGTCGGTTCCTCATCAAGCAGGAGCAGAATGATGGGACAACGTCGACGATGGACTCTGGTCGTCTACAGCTGCGCAGAGCGTGGGTGAACTATCAGGACACCGGAGCGTTCACTGTGAGTGTTGATAATGGCAACCGTGAGTTCAACTATCTGGTCAACGCCAGAGTCGGTTCTACAGGTCTACGTCTGGACCAGAAGGCCACAACTACAGGTCAATACCGCTTTCCTGTGACGGGTAACGCCCTGTACCAGAAGGTGTCCTTGAGTTCCTTCAACGCTTCCCCTGTGTCAATCATTGGGTGTGGCTGGGAGGGGAACTATACCAACCGCGCCAGTGGTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cd83892ef25e786ff870b5af77e234f4bb2817d6bee4135efd1e342a88ffedf9
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2920
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Klebsiella pneumoniae podophage Pharr Michalik,J., Lessor,L., Gill,J. and Liu,M. 2019-09-26 — GenBank