Protein
View in Explore- UniProt accession
- G0ZT38 [UniProt]
- Protein name
- Tail fiber protein
- RBP type
-
TF
- Protein sequence
-
QNLALNRPTHISQVVLAYKPGLVYTDPVNPDEADPSADELRFEGSVTRAAAISPDKVVYSLMLTPTEGSFTFNWMGLRASDGTLVAVSYLPDTVKVAKDEHQAGDTMIRNFILAFGSAAASLDVTVTPETWQFDFT
- Physico‐chemical
properties -
protein length: 136 AA molecular weight: 14782,41670 Da isoelectric point: 4,47086 aromaticity: 0,09559 hydropathy: -0,04632
Domains
Domains [InterPro]
IPR022225
3–136
3–136
1
136
Legend:
Pfam
SMART
CDD
TIGRFAM
HAMAP
SUPFAM
PRINTS
Gene3D
PANTHER
Other
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Aeromonas phage PAS-1 [NCBI] |
1074012 | Uroviricota > Caudoviricetes > |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
AEM36045.1
[NCBI]
Genbank nucleotide accession
JF342690
[NCBI]
CDS location
range 1 -> 408
strand +
strand +
CDS
CAAAATCTGGCCCTGAACCGGCCGACCCACATCAGCCAGGTGGTGCTGGCCTACAAGCCGGGGCTGGTCTACACCGACCCGGTCAATCCCGACGAAGCGGACCCCAGCGCTGACGAGCTGCGCTTTGAAGGCTCTGTGACCCGGGCGGCGGCCATCTCGCCGGACAAGGTGGTGTACTCCCTGATGCTGACCCCCACAGAGGGGTCCTTCACCTTCAACTGGATGGGGCTGCGCGCCAGCGACGGCACTCTGGTGGCGGTGTCGTACCTGCCGGACACGGTGAAGGTGGCCAAGGATGAACACCAGGCAGGCGACACCATGATCCGCAACTTCATTCTGGCCTTTGGTAGCGCGGCGGCGTCGCTGGATGTGACGGTGACGCCCGAGACCTGGCAGTTTGATTTCACC
Tertiary structure
PDB ID
5ed48d42a04ef779d64ea7f030756aa76919be2d3c0b5886722d20ed40ed7cce
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50
Literature
| Title | Authors | Date | PMID | Source |
|---|---|---|---|---|
| Isolation and characterization of a lytic Myoviridae bacteriophage PAS-1 with broad infectivity in Aeromonas salmonicida. | Kim JH, Son JS, Choi YJ, Choresca CH, Shin SP, Han JE, Jun JW, Kang DH, Oh C, Heo SJ, Park SC | 2012-05 | 22314935 | PubMed |
| Isolation and Characterization of a Lytic Myoviridae Bacteriophage PAS-1 with Broad Infectivity in Aeromonas salmonicida | J. H. Kim, J. S. Son, Y. J. Choi, C. H. Choresca, S. P. Shin, J. E. Han, J. W. Jun, D. H. Kang, C. Oh, S. J. Heo, S. C. Park | 2012-02-08 | 10.1007/s00284-012-0091-x | DOI |