Protein

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Genbank accession
XLL15409.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSFNSRESSLADGQPVRLYQFSRGAIRWSYNSSDRDITYQNQIFRTVPGGITDNGIICSGDPQSDQFVITAPADLDVALLYKSRSPSGAIDLVVYDMHYGDTEAAVSWVGQIGDVDWPTVDSCRITCVSEDELMDQPGLIDTYCRTCTAVVGDHRCKVNLVPYRVTLTPQSISGWVISSGVVAGYADGWFTGGYVEWQVDGDNYDSRYIERHAGPDLYILGGTEGIPAGGQLRVYPGCDGLAQTCDDKFSNLPNFRGFNAMQGKSPFDGDQVW
Physico‐chemical
properties
protein length:273 AA
molecular weight: 29938,82610 Da
isoelectric point:4,36685
aromaticity:0,10989
hydropathy:-0,28608

Domains

Domains [InterPro]
DC_0733
STR
1–187
DC_0733 IPR018964
IPR011928
Unmapped
19–271
IPR011928
PF09931
ATT
32–159
PF09931 IPR018964
XLL15409.1
1 273
Architecture
STR
ATT
STR
RBD
STR 1-31 | ATT 32-159 | STR 160-187 | RBD 188-264 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLL15409.1
1 273
Domain Start End Length (AA) Confidence
N-terminal 1 271 271 0,7496
Central domain 272 271 1 0,1088
C-terminal 272 273 1 0,7533
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-271
Central
272-271
C-terminal
272-273

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage VAC3
[NCBI] 		3378326 Viruses >
Host Pseudomonas aeruginosa PA14
[NCBI] 		652611 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLL15409.1 [NCBI]
Genbank nucleotide accession
PQ466445 [NCBI]
CDS location
range 5836 -> 6657
strand -
CDS
ATGAGTTTTAACAGCCGCGAAAGCTCGCTCGCGGATGGGCAGCCGGTGCGGCTGTACCAGTTCAGCCGTGGAGCCATCCGCTGGAGCTACAACAGCAGCGACCGGGACATCACTTATCAAAACCAGATTTTCCGCACCGTGCCGGGCGGCATCACTGACAACGGGATCATCTGTTCCGGCGATCCGCAGTCCGACCAGTTCGTCATCACCGCGCCGGCCGACCTCGACGTCGCGCTGCTGTACAAGTCCCGGTCGCCGAGCGGTGCCATCGACCTGGTCGTCTACGACATGCACTACGGCGACACCGAGGCAGCGGTTTCCTGGGTGGGCCAGATTGGCGATGTGGACTGGCCGACCGTGGATAGCTGCCGCATAACGTGCGTGTCAGAAGACGAACTGATGGACCAGCCCGGCTTGATCGACACCTACTGCCGCACCTGCACGGCAGTCGTTGGCGACCATCGCTGCAAGGTCAACCTCGTTCCGTATCGCGTGACGCTGACGCCGCAGAGCATCAGCGGCTGGGTGATCTCCAGCGGCGTGGTCGCCGGCTATGCCGATGGCTGGTTTACCGGGGGCTACGTCGAGTGGCAGGTGGACGGCGACAACTACGATAGCCGCTACATCGAGCGGCACGCCGGACCCGATCTTTACATCCTGGGCGGCACTGAGGGCATTCCGGCAGGTGGCCAACTGCGGGTTTATCCGGGTTGCGACGGGCTCGCGCAGACCTGCGACGACAAATTCAGCAACCTCCCCAACTTCAGGGGGTTTAACGCGATGCAAGGCAAGTCGCCGTTCGATGGCGATCAGGTCTGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
2e0ca4ee896c6665a9ebf42f2fb2f848b2d2343ae31e383358845f4c0481eddb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9016
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Mucosal-adapted bacteriophages as a preventive strategy for a lethal Pseudomonas aeruginosa challenge in mice Coelho,L.F.L., Terceti,M.S., Neto,S.P.L., Amaral,R.P., Santos,A.L.C., Gozzi,W.P., Carvalho,B.A., Cunha,G.A., Durante,M.F.R., Sanchietta,L., Marangoni,G.S., Gabriel,M.L.C., Malaquias,L.C.C., Celis,E.L.H., Apolinario,G.S., Araujo,J.P. Jr., Oliveira,C.E., Queiroz,V.F. and Almeida,G.M.F. 2024 — GenBank