Protein

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Genbank accession
AGW43677.1 [GenBank]
Protein name
minor structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
Protein sequence
MATKQYYILNGELKRIGTLSLDGATVFTSDTITHQYASADQTNSSYGENPDAEDTTQARSKNRKSKEYNHYGTIVVPQKQPDSAKVVEGNYIAKHDDVLDRWYIFRIWHTTETLLASGLAVTSAELIDLGLWELSHTIVPAKTYTNCTAKTAFQWLAQKLTWDLDMSKLTTTLTMSKIEFDGTSRASSMLQTLLQDYDLECDFYVKATSNGTITDKIFEVGNKLNSEIYSGTVFVGQNVTGCTRDITGNIVTKLYVFGPNGETMASANGGRTYIVDDAANRQYNPNWRTTYLEGAYTSNSTTDAHGLKAIAKTILADTNHPQYAYTVTVPHTMHPRLGSVVRTVNTDFTPEMVTKERVMATTESYADPSQNTIQFGEFQTVTRITPAWLSNFTNQIANAVQKAMQDSSSIDPVVLTPDGVDFDKSNSSKRVIIQAYEGGTNISAFLDSNGFIFRQISESGQYGTATRGYLQSVTGLKLGEYRATIDNDYFSTTPEVAADQTAAKSLGRLTPSARGRDATEQYVVKLSDGTYLSSTAWPDTSHSLDGHGDDTLYQHWKSDGKTLIDDMQVASGGHGSSFGVKEENGSIWIYGVTKNFDSTSKRFRICKFKYQGGQDITSAVKSDTDTFTIGLAFSDSIRVNYDAKHDLIGITRADGHYEVLKASQTLAGDHDILYRIDMTQYGFDLNKQTFQSSCLDFPYVYWHSGDYDMHDYRMLYCANVVHQGKEFELNYDFSQSLPLRYDTVEPETIWMQPNGKLLASFNCHDAQDGESVAHTHAMFEIPVTNRTPIILTRGTIPE
Physico‐chemical
properties
protein length:798 AA
molecular weight: 88836,54030 Da
isoelectric point:5,29054
aromaticity:0,10401
hydropathy:-0,45752

Domains

Domains [InterPro]
DC_0109
STR
1–777
DC_0109
IPR007119
Unmapped
59–376
IPR007119 IPR048799
IPR010572
ENZ
142–379
IPR010572
AGW43677.1
1 798
Architecture
STR
STR 1-777 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGW43677.1
1 798
Domain Start End Length (AA) Confidence
N-terminal 1 539 539 0,9791
Central domain 540 787 249 0,1992
C-terminal 788 798 10 0,0785
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-539
Central
540-787
C-terminal
788-798

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage phiJB
[NCBI] 		1399941 No lineage information
Host Lactobacillus delbrueckii
[NCBI] 		1584 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGW43677.1 [NCBI]
Genbank nucleotide accession
KF188409 [NCBI]
CDS location
range 34558 -> 36954
strand +
CDS
ATGGCAACAAAACAGTACTACATCTTAAACGGAGAATTGAAGCGGATAGGGACGCTTTCGCTTGATGGGGCGACTGTGTTTACCAGTGATACGATCACTCACCAGTATGCGTCAGCTGACCAAACCAACAGTTCATACGGCGAAAATCCAGACGCTGAAGACACGACGCAGGCACGGAGCAAGAACCGGAAGTCAAAGGAATACAACCACTATGGCACGATTGTAGTGCCCCAAAAGCAGCCAGACAGCGCGAAAGTGGTGGAAGGTAACTACATCGCAAAGCATGACGACGTGTTAGATCGTTGGTACATCTTCCGCATCTGGCACACGACCGAAACGCTGCTGGCGTCAGGCTTAGCCGTTACATCGGCAGAGCTGATTGACCTGGGGCTCTGGGAGCTTTCCCACACGATAGTCCCGGCCAAGACCTACACCAACTGCACGGCGAAAACAGCCTTCCAGTGGTTAGCTCAAAAGCTGACCTGGGACTTGGACATGTCCAAACTGACTACTACGCTGACTATGTCAAAAATCGAATTTGACGGGACCAGCCGGGCTAGCTCCATGCTTCAAACTCTCCTCCAAGACTACGACCTGGAATGTGACTTTTACGTAAAAGCCACATCGAACGGCACGATCACGGACAAGATTTTTGAAGTTGGCAACAAACTAAACTCTGAAATCTACTCCGGCACCGTCTTCGTTGGTCAAAACGTTACCGGGTGCACACGTGACATCACGGGTAACATTGTCACTAAGCTCTATGTTTTTGGGCCAAATGGCGAGACAATGGCCTCCGCCAATGGTGGCAGAACTTACATCGTCGATGATGCTGCTAACCGTCAATATAACCCAAATTGGCGGACGACTTATCTAGAAGGTGCCTACACAAGTAACTCAACGACCGATGCACATGGCCTTAAAGCAATTGCCAAGACAATCCTGGCGGATACTAACCACCCACAGTACGCCTACACGGTCACAGTCCCACACACGATGCATCCCCGGCTGGGGAGTGTAGTTCGGACGGTCAACACGGACTTCACGCCAGAGATGGTTACCAAAGAGCGTGTCATGGCCACAACGGAAAGCTATGCTGATCCGTCACAGAACACAATCCAGTTCGGTGAGTTTCAAACCGTAACACGGATTACGCCAGCTTGGCTATCTAACTTCACGAATCAAATCGCTAACGCCGTCCAGAAGGCTATGCAGGACAGCTCATCGATAGATCCAGTAGTCTTGACTCCAGACGGGGTCGATTTTGACAAGTCCAACTCATCAAAGCGCGTGATTATCCAGGCTTACGAAGGCGGGACAAACATCTCAGCCTTCCTGGACAGCAACGGCTTTATTTTTCGCCAAATTTCAGAATCCGGCCAGTATGGGACAGCAACGCGGGGATACTTGCAATCAGTAACCGGGCTAAAGCTTGGAGAGTATCGGGCAACGATCGATAACGACTACTTTTCGACTACACCAGAAGTTGCGGCTGATCAGACTGCTGCCAAGTCTTTGGGCCGGTTAACGCCAAGTGCTAGAGGCAGGGATGCTACTGAACAATACGTTGTAAAGCTGAGCGACGGAACTTACTTGTCAAGCACCGCCTGGCCAGATACTAGTCATAGTTTGGATGGCCACGGTGATGATACGTTATACCAGCACTGGAAGAGTGATGGCAAAACGTTGATTGACGACATGCAAGTGGCCAGTGGCGGTCACGGCTCTAGCTTTGGTGTCAAAGAAGAAAACGGTTCAATCTGGATTTATGGTGTTACCAAGAATTTTGACAGCACTAGCAAGCGGTTTAGAATCTGCAAGTTCAAGTATCAAGGTGGCCAGGACATCACCTCAGCGGTTAAATCTGACACTGACACGTTTACGATTGGCCTAGCGTTTTCTGACAGCATTAGAGTCAACTACGATGCCAAGCATGACCTGATCGGGATCACCAGAGCTGATGGCCACTACGAAGTGCTGAAAGCCAGCCAAACTTTAGCAGGGGATCACGATATCTTGTATCGCATCGACATGACGCAGTATGGTTTTGACTTAAACAAGCAGACATTCCAATCATCTTGCCTGGATTTCCCCTATGTTTACTGGCACTCTGGGGACTATGACATGCACGACTATCGTATGCTTTACTGCGCTAATGTGGTGCACCAGGGCAAAGAATTCGAGCTCAACTATGACTTCTCGCAATCTCTTCCTTTAAGATACGACACAGTCGAGCCAGAAACGATCTGGATGCAACCAAATGGGAAGCTGCTGGCAAGCTTTAACTGCCACGATGCACAGGATGGTGAAAGCGTAGCCCACACTCACGCGATGTTTGAAATCCCAGTAACCAACCGCACGCCAATTATATTGACGCGGGGAACAATCCCAGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3d2356ed5f398c9504631b298c7c0ebccc63e08cabec5a74d9842457b1eb7dc7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7707
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50