Protein

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UniProt accession
E3SJT6 [UniProt]
Protein name
Fibrillar collagen NC1 domain-containing protein
RBP type
TSP
Evidence RBPdetect
Probability 0,83
Protein sequence
MSTVKTATIEGTSDNDFVVVVPTDGNLIIGGGLEFGSDANLSIPVGNTAQRPSGQALQTGMIRFNTDVGFIEVYTGANWINFGETAASGGYVDLGTQANPASSALAIKRQYPNAPDGVYWINPSGTGGDAFSATQVYCDMTTDGGGWMMVAYAGNINTNKTNTVGSNYLPLFNTYGTLSSTAKTNRTAFSRMDFAKAIEGASDTSQMMARRTECQSKIFIWEITELNRFDTTSNVNWTFPANNIGTVIRKCRMSNKGPLGLVSRDYIAGEADRVRYENGPSYPGIAWNSSFNANNDNSGSFEQFLVRRSILYWETNENSYQANQWFHADPMHLAASRGPDNGVQDMEFYFREEEPGFS
Physico‐chemical
properties
protein length:358 AA
molecular weight: 39084,65460 Da
isoelectric point:4,73551
aromaticity:0,11453
hydropathy:-0,40950

Domains

Domains [InterPro]
G3DSA:2.60.120.1000
91–216
G3DSA:2.60.120.1000
PTHR16146
93–255
PTHR16146
IPR000885
95–143
IPR000885
IPR036056
98–155
IPR036056
NF040941
103–150
NF040941
E3SJT6
1 358
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-ShM2
[NCBI] 		445683 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 8102
[NCBI] 		84588 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

Description Category Evidence (source)
GO:0005615 extracellular space Cellular Component IEA:TreeGrafter (UniProt)
GO:0005201 extracellular matrix structural constituent Molecular Function IEA:InterPro (UniProt)
GO:0070492 oligosaccharide binding Molecular Function IEA:TreeGrafter (UniProt)

Tertiary structure

PDB ID
069e73301c6844510665b99c55c26d5db274546199d1a02f6cfe3426716779b4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5358
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50