Protein

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Genbank accession
CAB4182500.1 [GenBank]
Protein name
Pectate lyase superfamily protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSESKTFTSGTLINSGWLNAVDATTYEALGDGSLNPPTTRTQVTTNIQSLATGTGAVARSVQSKLNDFVSVKDFGATGNGTTNDTVAIQAAMLSTSTAGKRLFFPAGIYLVTDSLIMCQYTNIYGEYNYQGWNDSTNNRSTIIQFTPTSAKSLFVASTSNGTSDGFVSDISISDMCLFGDNTANSQSAIYASQVIYSAFKNLKIWNFQTGVRCAQTINNRFENLNIGYCTTACVTYNESTPTTDVWEQCTFNKSPIGVDTSDNVAIGIRFNNCLFEDLTTYGVNLSKGCSSWAFTNCYSENVPSSNLAYGSMFHIGFDGTAVGVVSSLDIIGGVYQGSSVYASTAGTWLNVDESYSVKVVAPHILNIGTIVRTTANTVANAITFLGNSIQGTGAFYSGPTGKLTGIYSQYELNNGEGNIVILRGRDVVVDQAYFTNATYNAVTVAALPVVSSVGAGAAAFVNNASLNTFGSVAVTSSTALASVVITGTAGQFSCTAATLQIGMQLNISGTFGGTGSITGYTNPKSYYVIATNGTTTFTLSATAGGAAITTTVGTPTGLTYLIGYMVPVYSDGMSWRIG
Physico‐chemical
properties
protein length:578 AA
molecular weight: 60599,73190 Da
isoelectric point:4,75847
aromaticity:0,10381
hydropathy:0,11419

Domains

Domains [InterPro]
IPR012334
38–311
IPR012334
IPR011050
67–439
IPR011050
IPR024535
68–301
IPR024535
CAB4182500.1
1 578
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4182500.1 [NCBI]
Genbank nucleotide accession
LR797044 [NCBI]
CDS location
range 4860 -> 6596
strand +
CDS
ATGAGTGAAAGCAAAACATTTACTAGCGGTACGTTGATTAACTCTGGGTGGCTTAACGCGGTTGATGCAACTACGTATGAAGCTCTTGGAGATGGGAGTCTTAATCCCCCGACTACACGCACACAAGTTACCACTAACATTCAATCACTAGCTACCGGCACAGGCGCTGTAGCAAGATCGGTTCAGTCTAAATTAAATGATTTTGTGAGCGTTAAAGATTTTGGTGCAACGGGTAACGGAACTACAAACGACACTGTGGCAATTCAAGCCGCAATGCTCTCCACTTCTACTGCTGGCAAACGGTTGTTTTTTCCGGCTGGCATTTACCTTGTTACTGACAGCTTAATTATGTGCCAGTACACCAATATATATGGTGAGTACAACTATCAAGGCTGGAACGATAGCACCAACAATCGCTCAACCATTATTCAGTTCACACCTACTTCTGCCAAATCACTATTTGTAGCGTCCACATCTAACGGCACATCTGATGGTTTTGTTTCCGACATTAGCATTTCGGATATGTGTTTGTTTGGCGATAATACAGCTAACTCCCAAAGCGCCATTTACGCTAGCCAAGTAATTTATTCGGCGTTTAAGAACCTAAAAATTTGGAATTTTCAAACTGGCGTAAGGTGCGCGCAAACAATCAACAACAGGTTTGAAAATTTAAATATTGGCTATTGCACAACAGCCTGCGTGACCTATAACGAAAGCACACCGACAACAGATGTGTGGGAACAATGCACTTTCAATAAATCTCCTATTGGAGTAGATACAAGTGACAATGTTGCTATTGGCATTAGATTCAATAACTGTTTGTTTGAAGACCTAACCACCTACGGCGTTAATTTGTCAAAAGGATGTAGTTCTTGGGCATTTACAAACTGTTATTCGGAGAATGTTCCTTCTTCCAATCTTGCCTATGGATCAATGTTTCATATTGGATTTGATGGAACTGCCGTAGGTGTTGTTTCTTCTCTTGACATTATTGGCGGCGTTTATCAAGGAAGTAGTGTTTACGCATCAACGGCGGGTACTTGGCTTAATGTTGATGAATCCTATAGCGTTAAAGTAGTTGCCCCCCACATTTTAAATATTGGCACCATTGTACGAACCACGGCAAATACTGTTGCTAACGCAATTACTTTTTTAGGCAACAGCATACAAGGAACGGGTGCTTTTTACTCAGGGCCAACAGGAAAACTTACCGGTATTTATTCACAGTATGAATTAAATAACGGTGAGGGAAACATCGTAATTCTAAGAGGACGCGATGTTGTAGTAGATCAAGCATATTTTACTAATGCTACTTATAACGCTGTAACTGTAGCAGCTTTGCCCGTAGTTTCTTCTGTTGGTGCAGGTGCAGCCGCCTTTGTGAACAACGCCAGTCTTAATACCTTTGGTTCTGTAGCCGTAACCAGTTCAACGGCACTGGCATCGGTAGTAATTACAGGAACCGCAGGACAGTTTAGTTGCACTGCCGCAACTCTGCAAATTGGTATGCAACTCAATATCTCAGGAACCTTTGGTGGAACTGGAAGCATTACAGGCTACACAAATCCAAAAAGTTATTACGTTATTGCAACCAATGGAACAACCACGTTTACATTGTCTGCAACTGCTGGTGGGGCCGCAATAACTACGACAGTGGGAACACCGACTGGGTTGACCTATTTAATAGGTTACATGGTGCCTGTCTACAGTGATGGAATGAGCTGGAGAATTGGATAA

Tertiary structure

PDB ID
24178ab0a94688bf25b6ef519c04e32d98eddc847e6cf5ba14ccfbd23ec6ac2a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7197
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50