Protein

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Genbank accession
QOI72016.1 [GenBank]
Protein name
putative DNA condensation protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLPFPIISSTPILEKLVITKIAAGQEHFLFLTSTGDVYGIGKNTYGQLGTGNTITQTDYVKVFSGARDIFCGERISFVIRDSDSAIMATGAVNSTGFSGNISTWQARTNLNVVASKGVKKICASQKICAILCNDNTLYTVGSGYLGNGVYTSGLQASLQNVANNAYDVSVSTESMYYRDNNQNIYGVGEYWALNLPLTANNQATWASQYGGVYGDMFNPELKTHYRSCLIPGSDRTYAVGLSSFGQLGNNNIADAQGNRVYPITFYLVGKPLFFGSSRGAAYMTMIATADGIYYSGRNTNGNVGFPGAGSAFGTYRQISLSNVIGPSTFDASLIQSLESNEYCTYLLYNNRVFITGLAFDGTSSTSLVPVNIKG
Physico‐chemical
properties
protein length:374 AA
molecular weight: 40147,57820 Da
isoelectric point:7,51317
aromaticity:0,11765
hydropathy:-0,02139

Domains

Domains [InterPro]
IPR009091
STR
5–374
IPR009091
IPR009091
STR
11–306
IPR009091
IPR051553
Unmapped
14–253
IPR051553
PF13540
STR
18–47
PF13540 IPR000408
IPR009091
STR
20–374
IPR009091
IPR000408
STR
21–37
IPR000408 IPR000408
QOI72016.1
1 374
Architecture
STR
STR 5-374
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QOI72016.1
1 374
Domain Start End Length (AA) Confidence
N-terminal 1 12 12 0,8794
Central domain 13 273 262 0,7577
C-terminal 274 374 100 0,2909
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-12
Central
13-273
C-terminal
274-374

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_47
[NCBI] 		2768774 Uroviricota > Caudoviricetes > Eneladusvirus >
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QOI72016.1 [NCBI]
Genbank nucleotide accession
MT939487 [NCBI]
CDS location
range 346786 -> 347910
strand -
CDS
ATGTTACCATTTCCAATAATAAGTTCAACACCTATTTTAGAAAAATTAGTAATTACTAAAATTGCTGCTGGACAAGAACACTTCTTGTTCTTAACATCTACTGGTGATGTATATGGTATAGGAAAAAATACATATGGACAACTTGGTACTGGAAATACAATAACACAAACAGATTATGTTAAAGTTTTTTCTGGTGCTAGAGATATATTTTGTGGAGAAAGAATATCATTTGTTATTAGAGATTCGGATTCAGCAATAATGGCAACTGGTGCAGTTAATAGTACCGGTTTTAGTGGAAATATATCTACATGGCAAGCTCGTACAAATTTAAATGTTGTAGCTTCCAAAGGGGTTAAAAAAATCTGTGCATCACAAAAAATCTGTGCAATACTATGCAATGACAACACGTTATATACAGTAGGTAGTGGGTATCTAGGTAATGGAGTTTACACATCTGGATTACAAGCATCATTACAAAACGTTGCAAACAACGCATATGATGTATCTGTTAGTACTGAAAGTATGTATTACAGAGATAATAATCAAAATATATATGGAGTTGGTGAGTATTGGGCATTGAACTTACCTTTAACTGCAAATAATCAAGCAACATGGGCTTCACAATACGGTGGTGTATATGGAGATATGTTCAACCCTGAACTTAAAACTCATTACAGATCATGTTTAATTCCTGGTTCAGACAGAACATACGCAGTTGGTTTATCATCTTTTGGTCAATTAGGTAATAATAATATTGCTGATGCACAAGGAAATAGGGTATATCCTATAACATTTTATTTGGTCGGTAAACCTTTATTCTTTGGTAGTTCTCGTGGAGCAGCATATATGACTATGATTGCTACTGCTGATGGAATATATTATTCTGGAAGAAATACAAATGGTAATGTTGGTTTTCCTGGTGCAGGATCTGCATTTGGAACATATAGGCAAATATCATTATCAAATGTTATTGGTCCTTCCACATTTGATGCATCATTAATACAATCGTTAGAGTCTAATGAATATTGTACATATTTGCTATACAATAATAGAGTTTTCATAACTGGTCTAGCATTTGATGGTACTAGTAGTACTTCATTAGTACCAGTTAATATAAAAGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2443a3f703c1d099e38051ca316857ab88d1853e722f9070b5eea99ee50c1b2c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8391
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_47 Kim,S.G., Lee,S.B. and Park,S.C. 2021-01-07 — GenBank