Protein

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Genbank accession
UMO77781.1 [GenBank]
Protein name
tail tubular B protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAAYASAYKAFLQGVSQQIPSERLSGQATAQHNMLSDPVTGVRRRLGVQFKKQFQWTGISKSNLQAWFTDVGGSPIHILVNTTAGTIKILNSSLVEEATLGPVAYLQATNRRSIRGASVGQEFFLCNTEKDPSVSTAAVGLNPDRTGYFYVVAGAFSRAYNVTITYGGTTFTVTYTTPNGASPGDAALSTPEYIAEQLVNGITSTAPSLGIQRDGPYVYVVNAAGTLRINTSAGTQYMQVSKMSSARTVGDLPARLPSNADGYNVRVGVGGTYQYYRYNASTTEWVEVGSYAGPSGITNAPISIYWNGSAWALNTSAFNGRPSGDDDSNPKHEWMTYGISGMGTYQGRLVILSGPMVSMSASNKPRDFFRTTVTSVVSSDPIEVGSSTNSSAAYEWCIPFQKDLVVFSNSYQAVVPSGNAAVTPSTAVVVPTSSFSADTTCSPISIGRTLLYAKPRSDNFFGILEMLPSSYTDSQYTSTDTTPHLPRYMPGRCSHAAASSVANIAAFVPTGDDSSAIIHEYHWDADNKVQQAWHTWSFPYPVAALYFSQDVMSICFAQNDYLVIGAIDVRAGNVAVDGTRRPFLDIYGNISIVAGVGTIPAWMLAFDPDIGDKIRLIQATGNLAGEAIGFEVSGNTITTVPSFQDGTAVLGLPYMSSIAIPGPIDRDYNGNPIYTGKVTLQRIIIGTRGSSEFDISVTDDRSGMDEGTVPTLYMSSKELELGRGLYGDIASSVVPCRTDARTTVVEMSTDKTGEINITSIEYIARAHHPIRRR
Physico‐chemical
properties
protein length:773 AA
molecular weight: 82925,82810 Da
isoelectric point:5,66158
aromaticity:0,09702
hydropathy:-0,11682

Domains

Domains [InterPro]
IPR058003
TTP
1–764
IPR058003
DC_0058
STR
1–773
DC_0058
UMO77781.1
1 773
Architecture
STR
STR 1-773
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UMO77781.1
1 773
Domain Start End Length (AA) Confidence
N-terminal 1 136 136 0,9349
Central domain 137 337 202 0,2279
C-terminal 338 773 435 0,2359
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-136
Central
137-337
C-terminal
338-773

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacteriophage Phi NF-1
[NCBI] 		2900273 Uroviricota > Caudoviricetes > Autographivirales > Catalonvirus > Catalonvirus NF1
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UMO77781.1 [NCBI]
Genbank nucleotide accession
OL634959 [NCBI]
CDS location
range 5346 -> 7667
strand +
CDS
ATGGCTGCCTATGCTTCAGCGTATAAAGCCTTCCTGCAAGGCGTATCTCAACAGATTCCTTCTGAGAGGCTATCGGGGCAGGCTACGGCACAACATAACATGCTATCCGATCCTGTCACAGGAGTTAGACGTAGATTAGGTGTCCAGTTCAAGAAGCAATTTCAATGGACTGGTATTAGCAAAAGTAACTTACAGGCATGGTTTACGGATGTAGGTGGTAGTCCCATTCACATACTGGTTAATACCACCGCAGGGACAATTAAGATACTGAATTCCTCCCTTGTAGAGGAGGCCACCCTGGGCCCTGTAGCGTATCTACAGGCCACAAATAGACGTTCTATCAGAGGTGCCTCAGTTGGACAGGAATTCTTCCTCTGCAATACTGAGAAGGATCCGAGTGTATCTACTGCTGCTGTAGGTCTTAACCCGGATAGAACAGGATACTTCTATGTGGTAGCCGGTGCCTTCAGTAGAGCATACAATGTTACCATCACGTATGGTGGTACTACCTTCACCGTGACCTATACCACACCCAATGGAGCTTCCCCTGGGGATGCGGCATTATCCACTCCCGAGTACATAGCCGAACAGTTAGTGAATGGTATAACGAGCACTGCGCCTTCCCTCGGTATACAGAGAGATGGGCCTTATGTCTATGTGGTCAATGCAGCAGGTACTTTGAGGATTAACACCTCAGCAGGGACTCAGTACATGCAGGTTAGTAAGATGTCCTCCGCTAGAACTGTTGGAGACTTGCCAGCCAGACTGCCTTCTAACGCTGATGGTTATAATGTAAGGGTAGGCGTGGGCGGTACGTACCAGTATTACAGGTATAATGCCTCTACTACTGAATGGGTAGAAGTAGGATCGTATGCAGGCCCTAGCGGTATAACCAATGCTCCAATCAGTATATACTGGAACGGGTCCGCATGGGCGTTGAACACATCCGCTTTCAATGGGAGACCATCGGGAGATGATGACTCGAACCCTAAGCACGAATGGATGACTTACGGGATATCAGGTATGGGTACCTACCAAGGTAGACTTGTTATACTATCCGGTCCTATGGTGTCTATGAGTGCCAGTAATAAGCCGCGTGACTTCTTCCGTACCACAGTCACATCAGTAGTTAGCTCTGACCCAATCGAGGTAGGTAGTAGTACCAACAGCTCAGCAGCTTACGAGTGGTGTATTCCATTCCAGAAGGATTTAGTTGTTTTCAGTAACAGTTACCAGGCTGTTGTCCCATCAGGGAATGCAGCAGTGACTCCCTCTACAGCAGTCGTAGTCCCTACCTCAAGTTTCTCGGCTGATACAACTTGCTCTCCGATATCGATAGGTAGAACACTTCTGTACGCTAAGCCTAGGTCGGATAACTTCTTTGGTATCCTAGAGATGTTACCTAGTAGCTACACAGATAGTCAATATACCTCAACAGATACAACACCTCATCTCCCACGGTATATGCCCGGGAGGTGTAGTCATGCAGCCGCCTCCAGTGTGGCTAACATAGCGGCCTTTGTCCCTACTGGGGATGATTCATCAGCGATCATCCATGAGTACCATTGGGATGCAGATAACAAGGTGCAGCAGGCATGGCACACATGGTCATTCCCCTACCCAGTAGCAGCACTTTATTTCTCCCAGGACGTGATGAGTATTTGCTTTGCTCAGAATGATTACCTGGTAATAGGTGCTATTGATGTGCGGGCGGGTAACGTGGCTGTAGATGGTACTAGAAGGCCATTCTTAGATATCTATGGGAATATCAGTATAGTAGCTGGAGTCGGGACCATTCCAGCTTGGATGCTAGCCTTCGACCCTGATATCGGAGATAAGATAAGATTAATCCAGGCTACCGGTAATCTGGCTGGGGAGGCTATCGGGTTTGAGGTGTCAGGTAATACAATAACTACTGTACCCAGCTTCCAGGATGGGACAGCTGTGCTTGGATTACCCTATATGTCGTCCATAGCGATTCCTGGGCCTATAGATAGAGATTACAATGGTAACCCTATCTACACAGGTAAAGTAACGCTACAGCGCATTATAATCGGTACTAGAGGCTCTTCTGAGTTTGATATATCCGTGACTGATGATAGATCGGGGATGGATGAGGGGACAGTACCTACCCTGTACATGAGTAGTAAAGAATTAGAGTTAGGTAGAGGACTGTACGGAGATATAGCCAGTTCGGTAGTACCATGCAGGACAGACGCCCGCACCACGGTAGTAGAGATGTCAACAGATAAGACAGGGGAGATAAACATAACCTCTATCGAGTACATAGCAAGAGCACACCACCCTATAAGGAGAAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
34d00827da7e0979c6db938810feab2148330bbda1215acfa558b77e81fe3687
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3021
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage-based biocontrol of nitrification in agricultural soil Muniesa,M., Quiros,P. and Salaet,I. 2018-06 — GenBank