Protein
View in Explore- Genbank accession
- CAK6604040.1 [GenBank]
- Protein name
- tail spike protein
- RBP type
-
TSPTFTSPTSPTSP
- Protein sequence
-
MSVTRLTSSLVRWKSKLANAIQRSLSSKMEESLSVLDFGAVADYNPTTKTGTDNTQAFRNAVAAAIAQNIRNVYAPGGPSAYMTTGEINLGGEGFTGGEGSRDVWRGITQGVHFFGDGPYSTIIAFNPPNTDAPCFSARGGWGTHSPRALSKLAIEPVNWADYNATSSGTGVLLQGCCFVPVTDVHIGRFHRGIHFWNKLQGTDDPTNTFTKGDFTEFNRITRVRVFNCDIDIDYQVSLGNNSFHGNSFTDCMCQINSYGGIGMRMWDDGSRNAIRPSSLPYEYIANVYNNKHEINWFGSDARTCYLMHIDKAQGHGCNGDMTVEAAVTLRAIGQYWYQSFGSLHSISAINTVVDGDTDTATRPVAFMWMNSAYPQVNFDGTDPLLTSGLTPRQYDLNNSGNTGMELLNIRGANTGAIWSIQNGAALGWILGRRAQADSRKGTRSVWQFSYNGEVIKSVSAANVGLQNSTGAGFGMLGDTLLRPYAASTISLGSPTYPFTRLRTTDWTVDTNGIVPVQDGIKNIGSSSLRVGTVFAATGTINTSDARLKTEVRPFTSEEILAAKALSEEIGMYQWVASIESKGDNAREHCGLTVQRAIEVMQQHNLDPFNYGFICHDVWDEVVEVSDETGDVISSTPAGDRYSFRFDQLSLFISRGIEARMSELESRM
- Physico‐chemical
properties -
protein length: 668 AA molecular weight: 72971,49070 Da isoelectric point: 5,59645 aromaticity: 0,09880 hydropathy: -0,28638
Domains
Domains [InterPro]
IPR012334
STR
2–327
STR
2–327
DC_0783
STR
2–632
STR
2–632
IPR011050
STR
28–271
STR
28–271
IPR030392
CHP
544–604
CHP
544–604
IPR030392
CHP
544–668
CHP
544–668
1
668
Architecture
STR 2-632 | RBD 633-668
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
668
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 42 | 42 | 0,9690 |
| Central domain | 43 | 371 | 330 | 0,9693 |
| C-terminal | 372 | 668 | 296 | 0,9427 |
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-42
1-42
Central
43-371
43-371
C-terminal
372-668
372-668
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Klebsiella phage vB_Kpn_K13PH07C1S [NCBI] |
3071629 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
CAK6604040.1
[NCBI]
Genbank nucleotide accession
OY979399.1
[NCBI]
CDS location
range 4432 -> 6438
strand +
strand +
CDS
TTGTCTGTTACCCGTCTCACTTCCAGTCTTGTACGTTGGAAGTCAAAACTGGCTAACGCCATTCAAAGGTCTTTATCTTCTAAGATGGAAGAGTCTCTCTCTGTCTTAGATTTCGGTGCAGTTGCTGACTACAACCCAACCACCAAAACTGGCACTGATAACACTCAGGCGTTCAGGAATGCAGTTGCAGCAGCTATTGCCCAAAACATACGTAATGTGTACGCCCCAGGTGGTCCCTCTGCGTACATGACAACCGGAGAGATTAACCTCGGTGGCGAGGGCTTCACAGGTGGTGAAGGTTCTCGTGATGTATGGCGTGGTATCACCCAAGGTGTACACTTCTTCGGTGATGGGCCATACAGCACAATCATTGCCTTTAACCCTCCAAACACAGATGCCCCATGTTTCTCGGCAAGGGGTGGGTGGGGCACGCACAGCCCCAGGGCTTTATCTAAGTTAGCAATAGAGCCTGTCAATTGGGCAGACTATAATGCAACCTCTTCCGGTACAGGTGTTCTGTTGCAAGGGTGCTGCTTTGTCCCGGTAACGGACGTACACATCGGTCGTTTTCACCGAGGCATCCACTTCTGGAATAAGCTGCAAGGCACCGACGACCCAACGAACACCTTCACCAAAGGTGACTTTACAGAGTTCAACAGGATTACCAGGGTACGTGTCTTTAACTGTGATATTGATATTGATTACCAGGTTAGTCTAGGTAACAACTCATTCCACGGTAACTCCTTCACAGACTGCATGTGCCAGATAAACTCATACGGCGGTATTGGTATGCGTATGTGGGATGATGGTTCTCGTAATGCCATCCGACCAAGCTCGCTACCTTACGAGTACATTGCCAACGTTTATAACAACAAGCATGAGATTAACTGGTTTGGCAGTGATGCAAGAACCTGTTACCTTATGCACATAGACAAGGCACAAGGTCATGGCTGTAATGGTGATATGACAGTTGAGGCAGCTGTAACTCTTCGAGCCATCGGCCAGTATTGGTATCAGAGCTTTGGTTCCCTGCATAGTATCTCAGCCATAAACACAGTTGTGGATGGGGACACAGATACCGCCACAAGGCCTGTTGCCTTTATGTGGATGAACAGTGCATACCCCCAGGTTAACTTTGATGGCACAGACCCTCTGCTGACATCTGGTCTTACCCCACGACAGTATGACCTTAATAACTCCGGCAACACAGGTATGGAGCTTTTAAACATACGTGGAGCAAACACTGGTGCAATCTGGTCTATCCAGAACGGTGCTGCCCTTGGGTGGATTCTCGGTCGTCGTGCTCAGGCAGATAGCCGCAAAGGTACTCGGAGTGTATGGCAGTTCTCCTACAATGGTGAGGTGATTAAGTCCGTCTCAGCGGCTAACGTTGGTCTCCAGAACTCAACTGGTGCTGGCTTTGGTATGCTTGGGGATACCTTGCTACGACCATATGCAGCAAGTACCATCTCTCTGGGCAGCCCAACCTATCCTTTCACTCGACTGAGAACCACGGATTGGACGGTAGACACCAATGGTATCGTTCCTGTGCAAGATGGCATAAAGAACATCGGTAGCTCCAGCCTAAGGGTTGGTACTGTATTCGCTGCCACTGGCACCATTAACACCTCAGATGCTAGACTCAAGACAGAGGTTCGTCCTTTTACCTCGGAAGAAATCTTGGCTGCTAAGGCTTTGAGTGAAGAGATTGGCATGTACCAATGGGTTGCTAGTATTGAATCCAAAGGTGATAATGCAAGGGAACACTGTGGGCTAACTGTACAGAGGGCGATAGAGGTTATGCAACAGCACAATCTTGACCCCTTCAACTATGGCTTCATCTGCCACGATGTGTGGGATGAGGTTGTGGAGGTCTCTGATGAGACTGGTGATGTTATCTCATCAACACCAGCAGGTGACAGATACAGCTTCCGATTTGACCAACTGAGTTTGTTTATCTCACGAGGTATCGAGGCCAGGATGTCCGAGCTGGAATCGCGTATGTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
2f9975bff1ae318c1662720b51e5a67bc2c89d44ed3615a716a93d1b87754de3
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50