Protein

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Genbank accession

GENB_5ef779123bb1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence RBPdetect2

Probability 0,79

Protein sequence

LKKKFSIVIISVLLLGYLAPFDTLLVGADETTVSEDTAVKTAEADSATEGIESETGSDDETAEESKEAKEAEASKETTEKEEKAKTEEPASNIKTEINTDKSQLKQTSLKATVPAGSTYNSLFPDDNLAKKLAVIITGNAAATGNESVDSAALLAISQLDLSGETGNDPTDISNIEGLQYLENLTSLNLSENNISDLAPLKDLVNLVSLNLSSNPTLVNLSGVEDLVNLQELNVSANKALEDISQVASLPVLKEISAQGCNIKTLELKNPAGAVLPELETFYLQENDLTNLTSLAKLPKLKNLYIKGNASLKSLATLNGATKLQLIDASNCTDLETLGDISGLLELEMIQLSGCSKLKEITSLKNLPNLVNITADSCAIEDLGTLNNLPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSIGTLDNLPKLEKLDLKENQITSISEITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINISNNVIRTVGKMTELPSLKEFYAQNNSISDISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQTNLITNIGTMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQNNYLNYTGTEGNLSSLSDLTNLTELNLRNNVYIDDISGLSTLSRLIYLNLDSNKIEDISALSNLTNLQELTLENNKIENISALSDLENLNKLVVSKNKIIDISPVANMVNRGAIVTASNQTYTLPTVLSYQSSFTIDNPVIWYDGTLLAPSSIGNSGNYKDGKITWTNMTATSSSTLFNFNRLKDGLTFSGTVTQPYKSAAKVTADAEQTYTIGDTISEEQFLKDVNAKSSDGAPVTSDFATVVDLNTFGEYEVTLTSEKDGIQGDSCKVIVKVLHGAPVISADQTISYDKHATITEKQFLEDIHASTDLDTAITTNFSTAVNLNKGGDYTVALNSENEDGVKAETVYVTVTVNKDPAPIISAKTEITYDKFSKKTEAAFLDDIDADTNDGSVITSNFATAVNLDKAGDYTVTLNSINSDGVAGTPTAIIVHVEKEKIATISTNTAQQYEKYAEINETQFLKDVHASINASPTTAVLESDFETVVKLDVPGTYTVTITATNEDGGVSAPKEVSVIVKKLPAPGITADKEITYPKFDEVSEAEFLSDIHAAINEKNVAITSNFSADVNLNKAGDYTVTLNATNEDGVKATPVEVIVHVQQGERPVITADATISYDKFANITEAKFLEDIHATSSDGQSSTVITSNFQTATNFKTAMSYTVTLNAVNEDGISAEPVAVTVTINKEPAAALKADAEVSYAKNEAVTESDFFKDVHLEGTEAPSTAKATSNFDSVVDRSKTGDYTVTINATNEDGAVSTPIEVIVHIEAECAPVITANAEVKYNKHEQTDERRFLYDSEAKIDEANVEIKTDFAEKVDINKVGTYTVTLTATNEDGQAANPVEVSVIVSDAAAEKVNVKYVDENGSEISAAETLTGNLDETFSIDAKSIAGYKCNATLSGVFSTVEQTVVFHYKAIKPGVVTIKYEDTNGKAVAEDKQITGEVGDDFEAEAQTVSGYSCRAIASGKITEEPQTITFTYSTATPSKKSGEITVQYVDESGKKLADSKKVTGNIDDSYSVEAKAIEGYSVVGDDSAKGVFTEKSQTVTFKYKKNTQVSKDDPKVKGKTNQPTSTDTKLKVDNNSLPATGDTENMILAVLIGFNMLIVASIFLFRKPKTNQ

Physico‐chemical properties

protein length:	1778 AA
molecular weight:	191396,18260 Da
isoelectric point:	4,48297
aromaticity:	0,05399
hydropathy:	-0,22897

Domains

Domains [InterPro]

IPR032675
STR
108–402

IPR032675 IPR032675 IPR032675 IPR014755 IPR013783 IPR044056 IPR044056 IPR013783 IPR044056 IPR044056 IPR044056 IPR044056 G3DSA:3.10.20.320 G3DSA:3.10.20.320 G3DSA:3.10.20.320

DC_1347
RBD
1699–1778

DC_1347

GENB_5ef779123bb1

1 1778

Architecture

STR

RBD

STR 108-863 | STR 865-940 | STR 943-1017 | STR 1023-1097 | STR 1103-1182 | STR 1186-1261 | STR 1267-1344 | STR 1352-1427 | STR 1433-1508 | RBD 1512-1778

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR032675	STR	IPR032675	108	402	Merged direct domain	Leucine-rich repeat domain superfamily	Central	Low	Positional only	55 proteins / 55 hits
IPR032675	STR	IPR032675	403	672	Merged direct domain	Leucine-rich repeat domain superfamily	Central	Low	Positional only	55 proteins / 55 hits
IPR032675	STR	IPR032675	673	785	Merged direct domain	Leucine-rich repeat domain superfamily	Central	Low	Positional only	55 proteins / 55 hits
IPR014755	STR	IPR014755	786	863	Merged direct domain	Copper resistance protein CopC/internalin, immunoglobulin-like	Central	Low	Positional only	6 proteins / 6 hits
IPR013783	STR	IPR013783	865	940	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
IPR044056	STR	DC_0768	943	1017	InterPro cluster	Internalin I, Ig-like domain	C-terminal	High	Text match	5 proteins / 37 hits
IPR044056	STR	DC_0768	1023	1097	InterPro cluster	Internalin I, Ig-like domain	C-terminal	High	Text match	5 proteins / 37 hits
IPR013783	STR	IPR013783	1103	1182	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
IPR044056	STR	DC_0768	1186	1261	InterPro cluster	Internalin I, Ig-like domain	C-terminal	High	Text match	5 proteins / 37 hits
IPR044056	STR	DC_0768	1267	1344	InterPro cluster	Internalin I, Ig-like domain	C-terminal	High	Text match	5 proteins / 37 hits
IPR044056	STR	DC_0768	1352	1427	InterPro cluster	Internalin I, Ig-like domain	C-terminal	High	Text match	5 proteins / 37 hits
IPR044056	STR	DC_0768	1433	1508	InterPro cluster	Internalin I, Ig-like domain	C-terminal	High	Text match	5 proteins / 37 hits
G3DSA:3.10.20.320	RBD	G3DSA:3.10.20.320	1512	1577	Merged direct domain	G3DSA:3.10.20.320	C-terminal	Low	Positional only	10 proteins / 10 hits
G3DSA:3.10.20.320	RBD	G3DSA:3.10.20.320	1578	1645	Merged direct domain	G3DSA:3.10.20.320	C-terminal	Low	Positional only	10 proteins / 10 hits
G3DSA:3.10.20.320	RBD	G3DSA:3.10.20.320	1646	1720	Merged direct domain	G3DSA:3.10.20.320	C-terminal	Low	Positional only	10 proteins / 10 hits
DC_1347	RBD	DC_1347	1699	1778	Novel HMM	DC_1347	C-terminal	Low	Positional only	16 proteins / 16 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Listeria phage LM 4-11-1 [NCBI]	3113835	Viruses >
Host	No host information

Coding sequence (CDS)

Genbank protein accession

OR846740.1_CDS_[23810..29146] [NCBI]

Genbank nucleotide accession

OR846740.1 [NCBI]

CDS location

range 23810 -> 29146
strand +

CDS

Genome Context

Tertiary structure

PDB ID

aa605db37225895805b15d090cad7da135e106282bc55bf8e4ae090afd7ece38

AlphaFold3

Source AlphaFold3

Method AlphaFold3

Resolution 0,8339

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence